RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
NEDD9-215ENST00000514660 VSTM2AQ8TAG5 236 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 FRZBQ92765 325 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 FAM210BQ96KR6 192 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 QTRT1Q9BXR0 403 aaKnown RBP7.38□□□□□ -1.23
NEDD9-215ENST00000514660 GSKIPQ9P0R6 139 aa7.38□□□□□ -1.23
NEDD9-215ENST00000514660 ST8SIA3O43173 380 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 SPP1P10451 314 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 HTN3P15516 51 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 NPY1RP25929 384 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 EMP1P54849 157 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 KRTAP10-1P60331 282 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 HSPE1P61604 102 aaKnown RBP7.37□□□□□ -1.23
NEDD9-215ENST00000514660 RPL8P62917 257 aaKnown RBP7.37□□□□□ -1.23
NEDD9-215ENST00000514660 WT1-ASQ06250 92 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 VSIRQ9H7M9 311 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 C21orf62Q9NYP8 219 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 PRNDQ9UKY0 176 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 OR51B2Q9Y5P1 312 aa7.37□□□□□ -1.23
NEDD9-215ENST00000514660 TMEM238LA0A1B0GVL6 79 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 K7EQG2 157 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 MBPP02686 304 aaPredicted RBP7.36□□□□□ -1.23
NEDD9-215ENST00000514660 FGF2P09038 288 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 TRAPPC2P0DI81 140 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 TRAPPC2BP0DI82 140 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 DLK1P80370 383 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 Q5BKY6 102 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 SPSB3Q6PJ21 355 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 OR52E5Q8NH55 327 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 OR1S1Q8NH92 325 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 ST6GAL2Q96JF0 529 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 NMES1Q9C002 83 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 NDUFA4L2Q9NRX3 87 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 HSPB7Q9UBY9 170 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 LINC00588Q9Y4M8 146 aa7.36□□□□□ -1.23
NEDD9-215ENST00000514660 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
NEDD9-215ENST00000514660 H0YIZ8 118 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 NXPH3O95157 252 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF688P0C7X2 276 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 SPART-AS1P0CW21 52 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 FAM3BP58499 235 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-215ENST00000514660 SPCS3P61009 180 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 CYCSP99999 105 aaKnown RBP7.35□□□□□ -1.23
NEDD9-215ENST00000514660 CD300CQ08708 224 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 SPINK9Q5DT21 86 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 ACTL10Q5JWF8 245 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 THOC7Q6I9Y2 204 aaKnown RBP7.35□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
NEDD9-215ENST00000514660 UBAC2Q8NBM4 344 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 OR1L8Q8NGR8 309 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 C17orf77Q96MU5 243 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 PDCD10Q9BUL8 212 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 COMMD5Q9GZQ3 224 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 MAGT1Q9H0U3 335 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 RBKSQ9H477 322 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 C11orf1Q9H5F2 150 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 FKBP11Q9NYL4 201 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 XCL2Q9UBD3 114 aa7.35□□□□□ -1.23
NEDD9-215ENST00000514660 TRAV14DV4A0A0A6YYC5 116 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF705FA8MVS1 300 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 FAM90A26D6RGX4 464 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 G3V3Q6 166 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 K7EPK0 472 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 TMEM50AO95807 157 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 GIPP09681 153 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF705DP0CH99 300 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 ZNF705BP0CI00 300 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 BTF3P20290 206 aaKnown RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 NKX2-1P43699 371 aaPredicted RBP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 PAX9P55771 341 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 POLR2GP62487 172 aaKnown RBP eCLIP7.34□□□□□ -1.23
NEDD9-215ENST00000514660 RAB32Q13637 225 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 SLC25A24Q6NUK1 477 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 NIPSNAP3BQ9BS92 247 aa7.34□□□□□ -1.23
NEDD9-215ENST00000514660 TRAV2A0A0B4J234 112 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 SMLR1H3BR10 107 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 DNASE2O00115 360 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-215ENST00000514660 SYNGR2O43760 224 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 CCNKO75909 580 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 MPC2O95563 127 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 SCGB1D2O95969 90 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 IGHV3-48P01763 117 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 OR13C7P0DN81 318 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 RAP2BP61225 183 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 PRCDQ00LT1 54 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 Q56UQ5 140 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 Q6ZRN7 208 aaPredicted RBP7.33□□□□□ -1.24
NEDD9-215ENST00000514660 PPP1R1CQ8WVI7 109 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 HINT2Q9BX68 163 aa7.33□□□□□ -1.24
NEDD9-215ENST00000514660 RCL1Q9Y2P8 373 aaKnown RBP7.33□□□□□ -1.24
NEDD9-215ENST00000514660 LSM5Q9Y4Y9 91 aaKnown RBP7.33□□□□□ -1.24
NEDD9-215ENST00000514660 CEBPZOSA8MTT3 80 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 INS-IGF2F8WCM5 200 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 WRBO00258 174 aa7.32□□□□□ -1.24
NEDD9-215ENST00000514660 MED6O75586 246 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms