RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 LEMD1Q68G75 181 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 LYG2Q86SG7 212 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 OR1S2Q8NGQ3 325 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 OR1S1Q8NH92 325 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 DTD1Q8TEA8 209 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 RABAC1Q9UI14 185 aa6.31□□□□□ -1.4
PDPN-209ENST00000510906 TRAV2A0A0B4J234 112 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 A0A1W2PS18 150 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 MPTX1A8MV57 137 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 PITX3O75364 302 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 YPEL3P61236 119 aaPredicted RBP6.3□□□□□ -1.4
PDPN-209ENST00000510906 PPP1R1AQ13522 171 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
PDPN-209ENST00000510906 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 ETFRF1Q6IPR1 90 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 MZT2BQ6NZ67 158 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 NOXA1Q86UR1 476 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 Q8WTZ3 238 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 SLC25A21Q9BQT8 299 aaPredicted RBP6.3□□□□□ -1.4
PDPN-209ENST00000510906 SRRQ9GZT4 340 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 CSTL1Q9H114 145 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 CACFD1Q9UGQ2 172 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 U3KQ87 197 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
PDPN-209ENST00000510906 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 CXorf65A6NEN9 183 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 K7EQG2 157 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 JTBO76095 146 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 SFT2D2O95562 160 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 IFNA4P05014 189 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 IL4P05112 153 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 HNRNPCP07910 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
PDPN-209ENST00000510906 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 IAPPP10997 89 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 SPANXN2Q5MJ10 180 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 LRTM2Q8N967 370 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 DEDD2Q8WXF8 326 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 NARS2Q96I59 477 aaKnown RBP6.29□□□□□ -1.4
PDPN-209ENST00000510906 CTDSP1Q9GZU7 261 aa6.29□□□□□ -1.4
PDPN-209ENST00000510906 IGKV1D-37A0A075B6S9 117 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 LINC00854A0A1B0GVQ3 168 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 GAGE10A6NGK3 116 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 KNCNA6PVL3 124 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
PDPN-209ENST00000510906 TOMM40O96008 361 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 CA1P00915 261 aaPredicted RBP6.28□□□□□ -1.4
PDPN-209ENST00000510906 HOXB5P09067 269 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 RD3LP0DJH9 198 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 PSG1P11464 419 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 GAMTQ14353 236 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 C16orf54Q6UWD8 224 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 CENPSQ8N2Z9 138 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 OR51G1Q8NGK1 321 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 SDHCQ99643 169 aaPredicted RBP6.28□□□□□ -1.4
PDPN-209ENST00000510906 MAGT1Q9H0U3 335 aa6.28□□□□□ -1.4
PDPN-209ENST00000510906 PIGBOS1A0A0B4J2F0 54 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 KRTAP9-6A0A140TA67 174 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 HELTA6NFD8 242 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 ZFP92A6NM28 416 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 PRSS47A8MTI9 375 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 NDUFB6O95139 128 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 SLC25A6P12236 298 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 GPX4P36969 197 aaPredicted RBP6.27□□□□□ -1.41
PDPN-209ENST00000510906 INPP1P49441 399 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 ATP5IP56385 69 aaPredicted RBP6.27□□□□□ -1.41
PDPN-209ENST00000510906 RPP30P78346 268 aaKnown RBP6.27□□□□□ -1.41
PDPN-209ENST00000510906 ZNF90Q03938 601 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 DHRS2Q13268 280 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 GGNBP1Q5YKI7 109 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 TRIQKQ629K1 86 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
PDPN-209ENST00000510906 STHQ8IWL8 128 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 OR11H2Q8NH07 326 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 GATAD1Q8WUU5 269 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 SLC35E1Q96K37 410 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 RARRES2Q99969 163 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 PBDC1Q9BVG4 233 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 PPP1R14DQ9NXH3 145 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 PAIP2BQ9ULR5 123 aaKnown RBP6.27□□□□□ -1.41
PDPN-209ENST00000510906 FLVCR2Q9UPI3 526 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 TMED3Q9Y3Q3 217 aa6.27□□□□□ -1.41
PDPN-209ENST00000510906 C9orf170A2RU37 121 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 PGPEP1LA6NFU8 196 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 FAM90A26D6RGX4 464 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 WRBO00258 174 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 BUB3O43684 328 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 SYNGR2O43760 224 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 ADAP1O75689 374 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 GIG44P09565 113 aaPredicted RBP6.26□□□□□ -1.41
PDPN-209ENST00000510906 C4BPBP20851 252 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 BTCP35070 178 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 EIF2B2P49770 351 aaKnown RBP6.26□□□□□ -1.41
PDPN-209ENST00000510906 UBE2MP61081 183 aaKnown RBP6.26□□□□□ -1.41
PDPN-209ENST00000510906 RAB11AP62491 216 aa6.26□□□□□ -1.41
PDPN-209ENST00000510906 OR2F1Q13607 317 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms