RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	PRR25	Q96S07	402 aa		7.75	□□□□□ -1.17
PTPN20-222	ENST00000509774	TMEM231	Q9H6L2	316 aa		7.75	□□□□□ -1.17
PTPN20-222	ENST00000509774	SMPX	Q9UHP9	88 aa		7.75	□□□□□ -1.17
PTPN20-222	ENST00000509774	ABCA13	Q86UQ4	5058 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	IGHV7-4-1	A0A0J9YVY3	117 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	FAM24A	A6NFZ4	105 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	GIP	P09681	153 aa	Predicted RBP	7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	PSG1	P11464	419 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	CRYBB3	P26998	211 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	NUP62	P37198	522 aa	Predicted RBP	7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	RAB31	Q13636	194 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	FCN2	Q15485	313 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	ACOT7L	Q6ZUV0	252 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	S100A7A	Q86SG5	101 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	OR11H7	Q8NGC8	314 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	THAP6	Q8TBB0	222 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	DYNLRB2	Q8TF09	96 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	CHAC2	Q8WUX2	184 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	ZNF414	Q96IQ9	312 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	METTL26	Q96S19	204 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	C20orf24	Q9BUV8	137 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	RNF126	Q9BV68	326 aa		7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	ZNF256	Q9Y2P7	627 aa	Predicted RBP	7.74	□□□□□ -1.17
PTPN20-222	ENST00000509774	IGKV1D-37	A0A075B6S9	117 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774		H0YIZ8	118 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	MPDU1	O75352	247 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	AKR1C1	Q04828	323 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	SLC38A11	Q08AI6	406 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	VWC2	Q2TAL6	325 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	LRRC37A5P	Q49AS3	106 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	PXDC1	Q5TGL8	231 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	BPIFC	Q8NFQ6	507 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	RHPN1-AS1	Q9BWJ2	59 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	VSIR	Q9H7M9	311 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	EDA2R	Q9HAV5	297 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	UQCC1	Q9NVA1	299 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	SLC45A2	Q9UMX9	530 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	RNF24	Q9Y225	148 aa		7.73	□□□□□ -1.17
PTPN20-222	ENST00000509774	IGKV1OR2-108	A0A075B7D4	117 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	CHEK1	O14757	476 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	TSPAN4	O14817	238 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	CST7	O76096	145 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	IL4	P05112	153 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	HNRNPC	P07910	306 aa	Known RBP eCLIP	7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	AP2S1	P53680	142 aa	Predicted RBP	7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	PLP1	P60201	277 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	ARL16	Q0P5N6	197 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	CD300E	Q496F6	205 aa	Predicted RBP	7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	C1orf194	Q5T5A4	169 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	RBPMS2	Q6ZRY4	209 aa	Known RBP	7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	HAPLN4	Q86UW8	402 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	LILRB2	Q8N423	598 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	GRAMD2B	Q96HH9	432 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	TMEM147	Q9BVK8	224 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	OR5AC2	Q9NZP5	309 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	RABAC1	Q9UI14	185 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	DNAH10	Q8IVF4	4471 aa		7.72	□□□□□ -1.17
PTPN20-222	ENST00000509774	IGSF23	A1L1A6	192 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	SMCO3	A2RU48	225 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	ZNF785	A8K8V0	405 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	KRTAP9-7	A8MTY7	169 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774		H3BS24	57 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	CCNK	O75909	580 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	GP9	P14770	177 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	RPL12	P30050	165 aa	Known RBP	7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	EIF2B2	P49770	351 aa	Known RBP	7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	CMC4	P56277	68 aa	Predicted RBP	7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	PAFAH1B2	P68402	229 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	EWSR1	Q01844	656 aa	Known RBP eCLIP	7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	NHLH2	Q02577	135 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	ZNF90	Q03938	601 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	CYP2G1P	Q6ZSU1	146 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	TMEM217	Q8N7C4	229 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	RNF125	Q96EQ8	232 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	SPAG8	Q99932	426 aa	Predicted RBP	7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	MLX	Q9UH92	298 aa		7.71	□□□□□ -1.18
PTPN20-222	ENST00000509774	TRAV2	A0A0B4J234	112 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	DFFB	O76075	338 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	FAM90A2P	Q658T7	463 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	BTNL8	Q6UX41	500 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774		Q6ZNX1	250 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	ZNF546	Q86UE3	836 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	OR5C1	Q8NGR4	320 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	FAM110A	Q9BQ89	295 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	C19orf73	Q9NVV2	129 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	MBD2	Q9UBB5	411 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	FBXL17	Q9UF56	701 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	WDR83OS	Q9Y284	106 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	HSPB11	Q9Y547	144 aa		7.7	□□□□□ -1.18
PTPN20-222	ENST00000509774	KMT2A	Q03164	3969 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	IGHV3OR16-8	A0A075B7F1	116 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	HELT	A6NFD8	242 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	AGPAT2	O15120	278 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	ZNF207	O43670	478 aa	Known RBP	7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	BUB3	O43684	328 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	RPL29	P47914	159 aa	Known RBP	7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	CAMLG	P49069	296 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	USF2	Q15853	346 aa	Predicted RBP	7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774	C16orf54	Q6UWD8	224 aa		7.69	□□□□□ -1.18
PTPN20-222	ENST00000509774		Q6ZRG5	221 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms