RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 KCNRGQ8N5I3 272 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 ARPC5LQ9BPX5 153 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 NEURL2Q9BR09 285 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
RNF4-213ENST00000509388 SLC39A9Q9NUM3 307 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 HIGD1AQ9Y241 93 aa11.25□□□□□ -0.61
RNF4-213ENST00000509388 DNHD1Q96M86 4753 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
RNF4-213ENST00000509388 G3V4G9 280 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 JTBO76095 146 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 IGLV1-51P01701 117 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 APOHP02749 345 aaPredicted RBP11.24□□□□□ -0.61
RNF4-213ENST00000509388 CD5P06127 495 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 PLP1P60201 277 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 RPL11P62913 178 aaKnown RBP11.24□□□□□ -0.61
RNF4-213ENST00000509388 CD300CQ08708 224 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 RPL7L1Q6DKI1 246 aaKnown RBP11.24□□□□□ -0.61
RNF4-213ENST00000509388 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 HSD17B11Q8NBQ5 300 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 OR2K2Q8NGT1 345 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 ST8SIA2Q92186 375 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 PFDN5Q99471 154 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 ARV1Q9H2C2 271 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 DNAJC4Q9NNZ3 241 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 MLXQ9UH92 298 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 RNF24Q9Y225 148 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 SELENOKQ9Y6D0 94 aa11.24□□□□□ -0.61
RNF4-213ENST00000509388 CXCL2P19875 107 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 PRR20EP86478 221 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 PRR20CP86479 221 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 PRR20DP86480 221 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 PRR20BP86481 221 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 PRR20AP86496 221 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 CD300EQ496F6 205 aaPredicted RBP11.23□□□□□ -0.61
RNF4-213ENST00000509388 SAMD5Q5TGI4 173 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 C10orf113Q5VZT2 155 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 RNF2Q99496 336 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 RSG1Q9BU20 258 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
RNF4-213ENST00000509388 HELTA6NFD8 242 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 BCL2L11O43521 198 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 BUB3O43684 328 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 C4BPBP20851 252 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 PAFAH1B2P68402 229 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 TCF24Q7RTU0 167 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 OR8I2Q8N0Y5 310 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
RNF4-213ENST00000509388 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
RNF4-213ENST00000509388 SLC25A22Q9H936 323 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 U3KQE9 123 aa11.22□□□□□ -0.61
RNF4-213ENST00000509388 TRRAPQ9Y4A5 3859 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 IGKV3-7A0A075B6H7 116 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 TRAV25A0A0B4J276 109 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 WIPF1O43516 503 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 ATP6V0CP27449 155 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
RNF4-213ENST00000509388 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 C1orf194Q5T5A4 169 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.61
RNF4-213ENST00000509388 SLC25A39Q9BZJ4 359 aaPredicted RBP11.21□□□□□ -0.61
RNF4-213ENST00000509388 ZNF98A6NK75 572 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 ACOT6Q3I5F7 207 aaPredicted RBP11.2□□□□□ -0.62
RNF4-213ENST00000509388 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
RNF4-213ENST00000509388 C16orf54Q6UWD8 224 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 TMEM61Q8N0U2 210 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 TMEM37Q8WXS4 190 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 UHRF2Q96PU4 802 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 PSMG3Q9BT73 122 aaPredicted RBP11.2□□□□□ -0.62
RNF4-213ENST00000509388 SHANK2-AS3Q9BTD1 123 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 CYTL1Q9NRR1 136 aa11.2□□□□□ -0.62
RNF4-213ENST00000509388 DNASE2O00115 360 aaPredicted RBP11.19□□□□□ -0.62
RNF4-213ENST00000509388 FAM78BQ5VT40 261 aa11.19□□□□□ -0.62
RNF4-213ENST00000509388 SIGLEC15Q6ZMC9 328 aa11.19□□□□□ -0.62
RNF4-213ENST00000509388 SCRT1Q9BWW7 348 aa11.19□□□□□ -0.62
RNF4-213ENST00000509388 ZNF256Q9Y2P7 627 aaPredicted RBP11.19□□□□□ -0.62
RNF4-213ENST00000509388 IZUMO1RA6ND01 250 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 H3BRN7 92 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 TSPAN4O14817 238 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 MBP02144 154 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 GP9P14770 177 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 RPL7P18124 248 aaKnown RBP11.18□□□□□ -0.62
RNF4-213ENST00000509388 GALR1P47211 349 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 TFPI2P48307 235 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 SERF2P84101 59 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 EGFEM1PQ0D2K5 195 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 GCSAMLQ5JQS6 135 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 LEMD1Q68G75 181 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 WFDC3Q8IUB2 231 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 GBGT1Q8N5D6 347 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 STXBP6Q8NFX7 210 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
RNF4-213ENST00000509388 GPR82Q96P67 336 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms