RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZNF785A8K8V0 405 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 A8MZ25 164 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 AGPAT2O15120 278 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 HYPMO75409 117 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 CCNKO75909 580 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 LINC00869P0C866 280 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 EDN2P20800 178 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 PLP1P60201 277 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 OR2F1Q13607 317 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 C16orf54Q6UWD8 224 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 SIGLEC15Q6ZMC9 328 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 Q6ZRG5 221 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 INO80EQ8NBZ0 244 aaPredicted RBP6.87□□□□□ -1.31
NUP54-207ENST00000508583 OR11H7Q8NGC8 314 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 OR5C1Q8NGR4 320 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 ZNF414Q96IQ9 312 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 U3KQE9 123 aa6.87□□□□□ -1.31
NUP54-207ENST00000508583 IGHV3OR16-13A0A075B7E8 117 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 IGHV3-74A0A0B4J1X5 117 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 IGHV3-66A0A0C4DH42 116 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 OR11H12B2RN74 326 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 C17orf112F2Z3M2 114 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 BUB3O43684 328 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 IGHV4-30-4P0DP06 118 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 LYL1P12980 280 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 ORM2P19652 201 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 FGF7P21781 194 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 RPL12P30050 165 aaKnown RBP6.86□□□□□ -1.31
NUP54-207ENST00000508583 GALR1P47211 349 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 CAMLGP49069 296 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 SNRPD3P62318 126 aaKnown RBP6.86□□□□□ -1.31
NUP54-207ENST00000508583 ARL16Q0P5N6 197 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 FAM90A2PQ658T7 463 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 OR8I2Q8N0Y5 310 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 ZNF709Q8N972 641 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 OR1L4Q8NGR5 311 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 OR1B1Q8NGR6 318 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 CHAC2Q8WUX2 184 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 GLMPQ8WWB7 406 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 PFDN5Q99471 154 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 ATP5SQ99766 215 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 B9D2Q9BPU9 175 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 RNF126Q9BV68 326 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 MS4A6AQ9H2W1 248 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 HIGD1AQ9Y241 93 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 WDR83OSQ9Y284 106 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 HSPB11Q9Y547 144 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 DNAH3Q8TD57 4116 aa6.86□□□□□ -1.31
NUP54-207ENST00000508583 H0YIZ8 118 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 COX7A2P2O60397 106 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 IFNA5P01569 189 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
NUP54-207ENST00000508583 OR5G3P0C626 314 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
NUP54-207ENST00000508583 RPL7P18124 248 aaKnown RBP6.85□□□□□ -1.31
NUP54-207ENST00000508583 RPL29P47914 159 aaKnown RBP6.85□□□□□ -1.31
NUP54-207ENST00000508583 MEOX2P50222 304 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 NHLH2Q02577 135 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 ZNF266Q14584 549 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 CLINT1Q14677 625 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 Q8N1Y9 231 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 STXBP6Q8NFX7 210 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 OR2T35Q8NGX2 323 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 SCGB1C1Q8TD33 95 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 MGST2Q99735 147 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 SEPSECSQ9HD40 501 aaKnown RBP6.85□□□□□ -1.31
NUP54-207ENST00000508583 NRN1Q9NPD7 142 aa6.85□□□□□ -1.31
NUP54-207ENST00000508583 IGKV3-7A0A075B6H7 116 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 ZNF98A6NK75 572 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 CD7P09564 240 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 ID1P41134 155 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 B2MP61769 119 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 OPCMLQ14982 345 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 AQP10Q96PS8 301 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 SHANK2-AS3Q9BTD1 123 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 GGTLC1Q9BX51 225 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 NPCDR1Q9BY65 106 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 SLC25A39Q9BZJ4 359 aaPredicted RBP6.84□□□□□ -1.31
NUP54-207ENST00000508583 ARL6Q9H0F7 186 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 DOK5Q9P104 306 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 SELENOKQ9Y6D0 94 aa6.84□□□□□ -1.31
NUP54-207ENST00000508583 H3BRN7 92 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 FRMD6-AS1P0C7T7 363 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 ATF4P18848 351 aaPredicted RBP6.83□□□□□ -1.32
NUP54-207ENST00000508583 GATA2P23769 480 aaPredicted RBP6.83□□□□□ -1.32
NUP54-207ENST00000508583 TFPI2P48307 235 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 C10orf113Q5VZT2 155 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 WFDC3Q8IUB2 231 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 GBGT1Q8N5D6 347 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 GATAD1Q8WUU5 269 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 PARD6GQ9BYG4 376 aaPredicted RBP6.83□□□□□ -1.32
NUP54-207ENST00000508583 WDR61Q9GZS3 305 aaKnown RBP6.83□□□□□ -1.32
NUP54-207ENST00000508583 ARV1Q9H2C2 271 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 ZMAT4Q9H898 229 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 SRD5A3Q9H8P0 318 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 SLC25A22Q9H936 323 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 DNAJC4Q9NNZ3 241 aa6.83□□□□□ -1.32
NUP54-207ENST00000508583 C19orf73Q9NVV2 129 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms