RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 DEDDO75618 318 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 CA1P00915 261 aaPredicted RBP11.83□□□□□ -0.52
LMNA-222ENST00000508500 USF2Q15853 346 aaPredicted RBP11.83□□□□□ -0.52
LMNA-222ENST00000508500 Q5BKY6 102 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 C9orf62Q8N4C0 152 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 INO80EQ8NBZ0 244 aaPredicted RBP11.83□□□□□ -0.52
LMNA-222ENST00000508500 STXBP6Q8NFX7 210 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 OR1S2Q8NGQ3 325 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 OR1S1Q8NH92 325 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 TMEM231Q9H6L2 316 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
LMNA-222ENST00000508500 FXYD6-FXYD2A0A087WZ82 144 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 RPS10-NUDT3A0A1W2PQS6 291 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 K7EPK0 472 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 MBPP02686 304 aaPredicted RBP11.82□□□□□ -0.52
LMNA-222ENST00000508500 NPY1RP25929 384 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 OR10J1P30954 320 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 YPEL3P61236 119 aaPredicted RBP11.82□□□□□ -0.52
LMNA-222ENST00000508500 LRRC37A5PQ49AS3 106 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 C16orf54Q6UWD8 224 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 ACOT7LQ6ZUV0 252 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 TRPT1Q86TN4 253 aaKnown RBP11.82□□□□□ -0.52
LMNA-222ENST00000508500 PHLDA1Q8WV24 401 aaPredicted RBP11.82□□□□□ -0.52
LMNA-222ENST00000508500 GLMPQ8WWB7 406 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 NPIPB3Q92617 1050 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 RAB40CQ96S21 281 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 MBD2Q9UBB5 411 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 HSPB7Q9UBY9 170 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 DNAH6Q9C0G6 4158 aa11.82□□□□□ -0.52
LMNA-222ENST00000508500 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 L7N2F9 121 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 WRBO00258 174 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 DEFB4AO15263 64 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 LY6G6CO95867 125 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 ZNF688P0C7X2 276 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 TAS2R30P59541 319 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 NANOS2P60321 138 aaKnown RBP11.81□□□□□ -0.52
LMNA-222ENST00000508500 S100A10P60903 97 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 LGALSLQ3ZCW2 172 aaPredicted RBP11.81□□□□□ -0.52
LMNA-222ENST00000508500 Q8WTZ3 238 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 GRAMD2BQ96HH9 432 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 AQP10Q96PS8 301 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 MFFQ9GZY8 342 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
LMNA-222ENST00000508500 RBKSQ9H477 322 aa11.81□□□□□ -0.52
LMNA-222ENST00000508500 H0YIZ8 118 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 ARPC5O15511 151 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 S100A11P31949 105 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 NKX2-5P52952 324 aaPredicted RBP11.8□□□□□ -0.52
LMNA-222ENST00000508500 KCNRGQ8N5I3 272 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 TMEM217Q8N7C4 229 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 LSM5Q9Y4Y9 91 aaKnown RBP11.8□□□□□ -0.52
LMNA-222ENST00000508500 HSPB11Q9Y547 144 aa11.8□□□□□ -0.52
LMNA-222ENST00000508500 BUB3O43684 328 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 SYNGR2O43760 224 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 SCGB1D2O95969 90 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 TOMM40O96008 361 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 IL4P05112 153 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 STHQ8IWL8 128 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 Q8NAQ8 132 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 DTD1Q8TEA8 209 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 ACY3Q96HD9 319 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 CIB3Q96Q77 187 aaPredicted RBP11.79□□□□□ -0.52
LMNA-222ENST00000508500 C11orf1Q9H5F2 150 aa11.79□□□□□ -0.52
LMNA-222ENST00000508500 IGKV1D-37A0A075B6S9 117 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 TAAR5O14804 337 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 SCGB2A1O75556 95 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 IFNA10P01566 189 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 PSG1P11464 419 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 VAMP2P63027 116 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 ETFRF1Q6IPR1 90 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 CSNK1G2-AS1Q8NCQ2 148 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 SMIM8Q96KF7 97 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 SLC25A31Q9H0C2 315 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 OR5AC2Q9NZP5 309 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 RCL1Q9Y2P8 373 aaKnown RBP11.78□□□□□ -0.52
LMNA-222ENST00000508500 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
LMNA-222ENST00000508500 U3KQ87 197 aa11.78□□□□□ -0.52
LMNA-222ENST00000508500 RNF222A6NCQ9 220 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 TSC22D2O75157 780 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
LMNA-222ENST00000508500 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 CXCL2P19875 107 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.53
LMNA-222ENST00000508500 OR51G1Q8NGK1 321 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 NARS2Q96I59 477 aaKnown RBP11.77□□□□□ -0.53
LMNA-222ENST00000508500 X6R8D5 127 aa11.77□□□□□ -0.53
LMNA-222ENST00000508500 HELTA6NFD8 242 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 RD3LP0DJH9 198 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 RPL12P30050 165 aaKnown RBP11.76□□□□□ -0.53
LMNA-222ENST00000508500 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
LMNA-222ENST00000508500 POLR2GP62487 172 aaKnown RBP eCLIP11.76□□□□□ -0.53
LMNA-222ENST00000508500 ZNF90Q03938 601 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 BAXQ07812 192 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 GAMTQ14353 236 aa11.76□□□□□ -0.53
LMNA-222ENST00000508500 OPCMLQ14982 345 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms