RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-222	ENST00000508238	GIG44	P09565	113 aa	Predicted RBP	5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	USF2	Q15853	346 aa	Predicted RBP	5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	TMEM41B	Q5BJD5	291 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	TMED4	Q7Z7H5	227 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	FAM24B	Q8N5W8	94 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RARRES2	Q99969	163 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	C11orf68	Q9H3H3	251 aa	Known RBP	5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RBKS	Q9H477	322 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RABAC1	Q9UI14	185 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RNF24	Q9Y225	148 aa		5.81	□□□□□ -1.48
UBE2D3-222	ENST00000508238	CXorf65	A6NEN9	183 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SNRPGP15	A8MWD9	76 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SFT2D2	O95562	160 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	IL4	P05112	153 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SPP1	P10451	314 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	PSG1	P11464	419 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RAP2B	P61225	183 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	GAMT	Q14353	236 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	GGNBP1	Q5YKI7	109 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	LEMD1	Q68G75	181 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	MORN3	Q6PF18	240 aa	Predicted RBP	5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	TRPT1	Q86TN4	253 aa	Known RBP	5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	STXBP6	Q8NFX7	210 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	OR51G1	Q8NGK1	321 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	OR11H2	Q8NH07	326 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	ACY3	Q96HD9	319 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SRR	Q9GZT4	340 aa		5.8	□□□□□ -1.48
UBE2D3-222	ENST00000508238	IGKV1D-37	A0A075B6S9	117 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	WRB	O00258	174 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	CA1	P00915	261 aa	Predicted RBP	5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	ZNF688	P0C7X2	276 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	MAL	P21145	153 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	NUTF2	P61970	127 aa	Known RBP	5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	DHRS2	Q13268	280 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	PPP1R1A	Q13522	171 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	C1orf194	Q5T5A4	169 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SAMD13	Q5VXD3	122 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	OR8G2P	Q6IF36	304 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	STH	Q8IWL8	128 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	S100Z	Q8WXG8	99 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	LINC00476	Q8WZB0	136 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RNF125	Q96EQ8	232 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SLC35E1	Q96K37	410 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	RAB40C	Q96S21	281 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	TRGV9	Q99603	122 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	MFF	Q9GZY8	342 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	NRN1	Q9NPD7	142 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	FBXL17	Q9UF56	701 aa		5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	KLK5	Q9Y337	293 aa	Predicted RBP	5.79	□□□□□ -1.48
UBE2D3-222	ENST00000508238	PLEC	Q15149	4684 aa	Known RBP	5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	ALMS1	Q8TCU4	4167 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	ZFP92	A6NM28	416 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	ZNF705E	A8MWA4	302 aa	Predicted RBP	5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	PRSS46	E5RG02	174 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SYNGR2	O43760	224 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	NDUFB6	O95139	128 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SNRPD3	P62318	126 aa	Known RBP	5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	C4orf46	Q504U0	113 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	SIGLEC15	Q6ZMC9	328 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	THAP8	Q8NA92	274 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	CSNK1G2-AS1	Q8NCQ2	148 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	C11orf45	Q8TAV5	145 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	C8orf49	Q96NF6	230 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	HRH4	Q9H3N8	390 aa		5.78	□□□□□ -1.48
UBE2D3-222	ENST00000508238	IGKV1OR2-108	A0A075B7D4	117 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	C9orf170	A2RU37	121 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	KNCN	A6PVL3	124 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	MIF	P14174	115 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	ID1	P41134	155 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	NKX2-1	P43699	371 aa	Predicted RBP	5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	ZNF90	Q03938	601 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	PMS2P11	Q13670	270 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	ZNF846	Q147U1	533 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	BAK1	Q16611	211 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	PSMG4	Q5JS54	123 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	ACTL10	Q5JWF8	245 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	MZT2B	Q6NZ67	158 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238		Q8NAQ8	132 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	SDHC	Q99643	169 aa	Predicted RBP	5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	CCDC32	Q9BV29	185 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	SLC45A2	Q9UMX9	530 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	STRAP	Q9Y3F4	350 aa	Known RBP	5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	KMT2A	Q03164	3969 aa		5.77	□□□□□ -1.49
UBE2D3-222	ENST00000508238	HYDIN	Q4G0P3	5121 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238		H3BMM0	161 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	HOXB5	P09067	269 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	OR4E1	P0C645	316 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	C4BPB	P20851	252 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	TCTA	P57738	103 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	TAS2R30	P59541	319 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	NANOS2	P60321	138 aa	Known RBP	5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	GPR82	Q96P67	336 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	C1QTNF4	Q9BXJ3	329 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	MAGT1	Q9H0U3	335 aa		5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	PAIP2B	Q9ULR5	123 aa	Known RBP	5.76	□□□□□ -1.49
UBE2D3-222	ENST00000508238	ISLR	O14498	428 aa		5.75	□□□□□ -1.49
UBE2D3-222	ENST00000508238	SOCS3	O14543	225 aa		5.75	□□□□□ -1.49
UBE2D3-222	ENST00000508238	RBMY1A1	P0DJD3	496 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms