RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 LINC00305Q7Z4B0 112 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 OR11H1Q8NG94 326 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 SAT2Q96F10 170 aaPredicted RBP13.42□□□□□ -0.26
RNF4-209ENST00000507784 DUX3Q96PT4 197 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 UHRF2Q96PU4 802 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 C19orf24Q9BVV8 132 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 ZFAND3Q9H8U3 227 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 FUT9Q9Y231 359 aa13.42□□□□□ -0.26
RNF4-209ENST00000507784 TEP1Q99973 2627 aaKnown RBP13.41□□□□□ -0.26
RNF4-209ENST00000507784 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 SSX7Q7RTT5 188 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 SFT2D1Q8WV19 159 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 RAB24Q969Q5 203 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 ZNF414Q96IQ9 312 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 MRPL32Q9BYC8 188 aaKnown RBP13.41□□□□□ -0.26
RNF4-209ENST00000507784 SEPSECSQ9HD40 501 aaKnown RBP13.41□□□□□ -0.26
RNF4-209ENST00000507784 MRPL27Q9P0M9 148 aaKnown RBP13.41□□□□□ -0.26
RNF4-209ENST00000507784 MAST4O15021 2626 aa13.41□□□□□ -0.26
RNF4-209ENST00000507784 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 SEC14L6B5MCN3 397 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 ZP3P21754 424 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 SLURP1P55000 103 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 FGF8P55075 233 aaPredicted RBP13.4□□□□□ -0.26
RNF4-209ENST00000507784 UNQ9165/PRO28630Q6UXU0 137 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 S100A7AQ86SG5 101 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 GPHB5Q86YW7 130 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 HRH4Q9H3N8 390 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 TECRQ9NZ01 308 aaKnown RBP13.4□□□□□ -0.26
RNF4-209ENST00000507784 NF1P21359 2839 aa13.4□□□□□ -0.26
RNF4-209ENST00000507784 NMBP08949 121 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 NPPCP23582 126 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 S100A7P31151 101 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 HOXD3P31249 432 aaPredicted RBP13.39□□□□□ -0.27
RNF4-209ENST00000507784 CLLU1Q5K131 121 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 IQCF2Q8IXL9 164 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 METTL26Q96S19 204 aa13.39□□□□□ -0.27
RNF4-209ENST00000507784 SLC25A39Q9BZJ4 359 aaPredicted RBP13.39□□□□□ -0.27
RNF4-209ENST00000507784 IGHV3-49A0A0A0MS15 119 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 C8orf88P0DMB2 117 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 SYNJ2BPP57105 145 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 TAS2R45P59539 299 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 MORN5Q5VZ52 161 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 LEMD1Q68G75 181 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 NDUFA11Q86Y39 141 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 MBD3L1Q8WWY6 194 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 RAX2Q96IS3 184 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 SCRT1Q9BWW7 348 aa13.38□□□□□ -0.27
RNF4-209ENST00000507784 H3BRN7 92 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 CCL24O00175 119 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 HBE1P02100 147 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 TMEM190Q8WZ59 177 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 NARS2Q96I59 477 aaKnown RBP13.37□□□□□ -0.27
RNF4-209ENST00000507784 SHANK2-AS3Q9BTD1 123 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 PFDN2Q9UHV9 154 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 UFC1Q9Y3C8 167 aa13.37□□□□□ -0.27
RNF4-209ENST00000507784 C2CD3Q4AC94 2353 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 IGHV3OR16-13A0A075B7E8 117 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 IGHV3-74A0A0B4J1X5 117 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 IGHV3-66A0A0C4DH42 116 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 ZNF98A6NK75 572 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 OR7C2O60412 319 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 STAG3L2P0CL84 134 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 STAG3L3P0CL85 134 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 TM4SF20Q53R12 229 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 TMEM158Q8WZ71 300 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 SLC25A2Q9BXI2 301 aa13.36□□□□□ -0.27
RNF4-209ENST00000507784 ADARB2-AS1A8MUL3 147 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 CXorf1O96002 111 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 APOHP02749 345 aaPredicted RBP13.35□□□□□ -0.27
RNF4-209ENST00000507784 ARL14EPLP0DKL9 152 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 KLF5Q13887 457 aaPredicted RBP13.35□□□□□ -0.27
RNF4-209ENST00000507784 IL34Q6ZMJ4 242 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 REC114Q7Z4M0 266 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 TMPRSS5Q9H3S3 457 aa13.35□□□□□ -0.27
RNF4-209ENST00000507784 NIPBLQ6KC79 2804 aaeCLIP13.34□□□□□ -0.27
RNF4-209ENST00000507784 K7EMT4 169 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 LGALS9O00182 355 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 CRYBB3P26998 211 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 CCL20P78556 96 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 C12orf54Q6X4T0 127 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 DLX4Q92988 240 aaPredicted RBP13.34□□□□□ -0.27
RNF4-209ENST00000507784 PAXXQ9BUH6 204 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 RNF24Q9Y225 148 aa13.34□□□□□ -0.27
RNF4-209ENST00000507784 PYYP10082 97 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 GCHFRP30047 84 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 MYCNOSP40205 109 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 OR8I2Q8N0Y5 310 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 FAM167A-AS1Q96KT0 104 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 CITED1Q99966 193 aa13.33□□□□□ -0.28
RNF4-209ENST00000507784 DAZ1Q9NQZ3 744 aaKnown RBP13.33□□□□□ -0.28
RNF4-209ENST00000507784 TRAV1-1A0A0B4J248 108 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 IGHV7-4-1A0A0J9YVY3 117 aa13.32□□□□□ -0.28
RNF4-209ENST00000507784 A0A1W2PS18 150 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms