RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 IGLV1-51P01701 117 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 OR5G3P0C626 314 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 PAFAH1B2P68402 229 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 USF2Q15853 346 aaPredicted RBP15.24■□□□□ 0.03
USP53-203ENST00000507597 HIGD1AQ9Y241 93 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 PXMP4Q9Y6I8 212 aa15.24■□□□□ 0.03
USP53-203ENST00000507597 HELTA6NFD8 242 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 CHEK1O14757 476 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 GATA2P23769 480 aaPredicted RBP15.23■□□□□ 0.03
USP53-203ENST00000507597 DEFB114Q30KQ6 69 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 OXLD1Q5BKU9 147 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 C1orf194Q5T5A4 169 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 STPG3Q8N7X2 389 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 OR11H4Q8NGC9 324 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 GNPNAT1Q96EK6 184 aaPredicted RBP15.23■□□□□ 0.03
USP53-203ENST00000507597 VSIRQ9H7M9 311 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 DNAJC4Q9NNZ3 241 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 SLC39A9Q9NUM3 307 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 TIMM9Q9Y5J7 89 aa15.23■□□□□ 0.03
USP53-203ENST00000507597 PRR20EP86478 221 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 PRR20CP86479 221 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 PRR20DP86480 221 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 PRR20BP86481 221 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 PRR20AP86496 221 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 SAMD5Q5TGI4 173 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 MIC13Q5XKP0 118 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 ZNF414Q96IQ9 312 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 GPR82Q96P67 336 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 RNF2Q99496 336 aa15.22■□□□□ 0.03
USP53-203ENST00000507597 C10orf113Q5VZT2 155 aa15.21■□□□□ 0.03
USP53-203ENST00000507597 TMEM182Q6ZP80 229 aaPredicted RBP15.21■□□□□ 0.03
USP53-203ENST00000507597 GATAD1Q8WUU5 269 aa15.21■□□□□ 0.03
USP53-203ENST00000507597 ARV1Q9H2C2 271 aa15.21■□□□□ 0.03
USP53-203ENST00000507597 WFDC1Q9HC57 220 aa15.21■□□□□ 0.03
USP53-203ENST00000507597 U3KQE9 123 aa15.21■□□□□ 0.03
USP53-203ENST00000507597 MBP02144 154 aa15.2■□□□□ 0.02
USP53-203ENST00000507597 RPL11P62913 178 aaKnown RBP15.2■□□□□ 0.02
USP53-203ENST00000507597 SERF2P84101 59 aa15.2■□□□□ 0.02
USP53-203ENST00000507597 ST8SIA2Q92186 375 aa15.2■□□□□ 0.02
USP53-203ENST00000507597 DOK5Q9P104 306 aa15.2■□□□□ 0.02
USP53-203ENST00000507597 MLXQ9UH92 298 aa15.2■□□□□ 0.02
USP53-203ENST00000507597 IGHV3-49A0A0A0MS15 119 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 BUB3O43684 328 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 ACOT6Q3I5F7 207 aaPredicted RBP15.19■□□□□ 0.02
USP53-203ENST00000507597 CD300EQ496F6 205 aaPredicted RBP15.19■□□□□ 0.02
USP53-203ENST00000507597 C16orf54Q6UWD8 224 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 ADAMTSL5Q6ZMM2 481 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 TMUB2Q71RG4 321 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 TCF24Q7RTU0 167 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 OR8I2Q8N0Y5 310 aa15.19■□□□□ 0.02
USP53-203ENST00000507597 PSMG3Q9BT73 122 aaPredicted RBP15.19■□□□□ 0.02
USP53-203ENST00000507597 SLC25A39Q9BZJ4 359 aaPredicted RBP15.19■□□□□ 0.02
USP53-203ENST00000507597 ZNF98A6NK75 572 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 G3V4G9 280 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 BCL2L11O43521 198 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 GALR1P47211 349 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 FFAR4Q5NUL3 377 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 RPL7L1Q6DKI1 246 aaKnown RBP15.18■□□□□ 0.02
USP53-203ENST00000507597 HSD17B11Q8NBQ5 300 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 SPAG8Q99932 426 aaPredicted RBP15.18■□□□□ 0.02
USP53-203ENST00000507597 RSG1Q9BU20 258 aa15.18■□□□□ 0.02
USP53-203ENST00000507597 IGHV3OR16-13A0A075B7E8 117 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 IGHV3-74A0A0B4J1X5 117 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 DNASE2O00115 360 aaPredicted RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 TSPAN4O14817 238 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 APOHP02749 345 aaPredicted RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 RPL7P18124 248 aaKnown RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 CXCL2P19875 107 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 CMC4P56277 68 aaPredicted RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 EGFEM1PQ0D2K5 195 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 GUCA2BQ16661 112 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 LINC00305Q7Z4B0 112 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 SHANK2-AS3Q9BTD1 123 aa15.17■□□□□ 0.02
USP53-203ENST00000507597 ZNF471Q9BX82 626 aaPredicted RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 ZNF256Q9Y2P7 627 aaPredicted RBP15.17■□□□□ 0.02
USP53-203ENST00000507597 IGHV3-66A0A0C4DH42 116 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 OR4C46A6NHA9 309 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 H3BRN7 92 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 ATP6V0CP27449 155 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 SAMD13Q5VXD3 122 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 EIF5AL1Q6IS14 154 aaKnown RBP15.16■□□□□ 0.02
USP53-203ENST00000507597 SIGLEC15Q6ZMC9 328 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 MRPL32Q9BYC8 188 aaKnown RBP15.16■□□□□ 0.02
USP53-203ENST00000507597 SLC25A22Q9H936 323 aa15.16■□□□□ 0.02
USP53-203ENST00000507597 TRRAPQ9Y4A5 3859 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 TRAV2A0A0B4J234 112 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 TPT1P13693 172 aaKnown RBP15.15■□□□□ 0.02
USP53-203ENST00000507597 GP9P14770 177 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 M6PRP20645 277 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 EDN2P20800 178 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 MEOX2P50222 304 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 LGALSLQ3ZCW2 172 aaPredicted RBP15.15■□□□□ 0.02
USP53-203ENST00000507597 GTSCR1Q86UQ5 136 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 BPIFA4PQ86YQ2 179 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 OR2G3Q8NGZ4 309 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 GLMPQ8WWB7 406 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 VWFP04275 2813 aa15.15■□□□□ 0.02
USP53-203ENST00000507597 A0A1W2PPV4 95 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 RHOBP62745 196 aa15.14■□□□□ 0.01
USP53-203ENST00000507597 FAM78BQ5VT40 261 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms