RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 CITED4Q96RK1 184 aa14.36□□□□□ -0.11
LMNA-221ENST00000506981 C11orf1Q9H5F2 150 aa14.36□□□□□ -0.11
LMNA-221ENST00000506981 SLC45A2Q9UMX9 530 aa14.36□□□□□ -0.11
LMNA-221ENST00000506981 DNAH9Q9NYC9 4486 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 K7EQG2 157 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 GATA2P23769 480 aaPredicted RBP14.35□□□□□ -0.11
LMNA-221ENST00000506981 SULT1A1P50225 295 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 ARL16Q0P5N6 197 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 C1orf194Q5T5A4 169 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 TMEM217Q8N7C4 229 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 OR1B1Q8NGR6 318 aa14.35□□□□□ -0.11
LMNA-221ENST00000506981 DEFB131AP59861 70 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 RAP2BP61225 183 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 S100A7AQ86SG5 101 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 ZNF546Q86UE3 836 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 OR8I2Q8N0Y5 310 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 TMEM252Q8N6L7 170 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 NRN1Q9NPD7 142 aa14.34□□□□□ -0.11
LMNA-221ENST00000506981 IGSF23A1L1A6 192 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 E5RGE8 158 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 ZNF688P0C7X2 276 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 LINC00869P0C866 280 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 PET100P0DJ07 73 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 RPL35AP18077 110 aaKnown RBP14.33□□□□□ -0.12
LMNA-221ENST00000506981 S100A11P31949 105 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 RAB31Q13636 194 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 DCANP1Q8TF63 244 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 SLC25A31Q9H0C2 315 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 UQCC1Q9NVA1 299 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 DOK5Q9P104 306 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 ALG5Q9Y673 324 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 AGRNO00468 2067 aa14.33□□□□□ -0.12
LMNA-221ENST00000506981 H2BFSP57053 126 aa14.32□□□□□ -0.12
LMNA-221ENST00000506981 SNRPD3P62318 126 aaKnown RBP14.32□□□□□ -0.12
LMNA-221ENST00000506981 ZNF124Q15973 351 aa14.32□□□□□ -0.12
LMNA-221ENST00000506981 TMEM182Q6ZP80 229 aaPredicted RBP14.32□□□□□ -0.12
LMNA-221ENST00000506981 FAM24BQ8N5W8 94 aa14.32□□□□□ -0.12
LMNA-221ENST00000506981 SLC25A22Q9H936 323 aa14.32□□□□□ -0.12
LMNA-221ENST00000506981 HIGD1AQ9Y241 93 aa14.32□□□□□ -0.12
LMNA-221ENST00000506981 KIR2DL5BA0A0G2JN68 375 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 KIR2DL5BA0A0G2JPC4 375 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 UBE2CO00762 179 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 HYPMO75409 117 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 OR5G3P0C626 314 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 GALR1P47211 349 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 KIR2DL5AQ8N109 375 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 STPG3Q8N7X2 389 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 KIR2DL5BQ8NHK3 375 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 PPP1R1CQ8WVI7 109 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 RETNQ9HD89 108 aa14.31□□□□□ -0.12
LMNA-221ENST00000506981 UBE2L5PA0A1B0GUS4 154 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 AGPAT2O15120 278 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 ATP6V1FQ16864 119 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 RGS21Q2M5E4 152 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 PXDC1Q5TGL8 231 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 STHQ8IWL8 128 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 GPR82Q96P67 336 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 ARL6Q9H0F7 186 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 OR5AC2Q9NZP5 309 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 RNF24Q9Y225 148 aa14.3□□□□□ -0.12
LMNA-221ENST00000506981 ID1P41134 155 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 CAMLGP49069 296 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 PLP1P60201 277 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 BAXQ07812 192 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 PSMG4Q5JS54 123 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 SAMD13Q5VXD3 122 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 MGST2Q99735 147 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 MED28Q9H204 178 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 SEPSECSQ9HD40 501 aaKnown RBP14.29□□□□□ -0.12
LMNA-221ENST00000506981 TENM3Q9P273 2699 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 STAB2Q8WWQ8 2551 aa14.29□□□□□ -0.12
LMNA-221ENST00000506981 H3BRN7 92 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 MEOX2P50222 304 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 EWSR1Q01844 656 aaKnown RBP eCLIP14.28□□□□□ -0.12
LMNA-221ENST00000506981 VWC2Q2TAL6 325 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 SHANK2-AS3Q9BTD1 123 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
LMNA-221ENST00000506981 SLC25A32Q9H2D1 315 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 WDR83OSQ9Y284 106 aa14.28□□□□□ -0.12
LMNA-221ENST00000506981 COX7A2P2O60397 106 aa14.27□□□□□ -0.13
LMNA-221ENST00000506981 MPC2O95563 127 aa14.27□□□□□ -0.13
LMNA-221ENST00000506981 Q6ZWC4 215 aa14.27□□□□□ -0.13
LMNA-221ENST00000506981 SCRT1Q9BWW7 348 aa14.27□□□□□ -0.13
LMNA-221ENST00000506981 H0YIZ8 118 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 RPL7P18124 248 aaKnown RBP14.26□□□□□ -0.13
LMNA-221ENST00000506981 ATF4P18848 351 aaPredicted RBP14.26□□□□□ -0.13
LMNA-221ENST00000506981 FGF7P21781 194 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 PSMB3P49720 205 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 NHLH2Q02577 135 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 DEFB135Q30KP9 77 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 Q6ZRG5 221 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 OR5C1Q8NGR4 320 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 CSTL1Q9H114 145 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 ARV1Q9H2C2 271 aa14.26□□□□□ -0.13
LMNA-221ENST00000506981 KNCNA6PVL3 124 aa14.25□□□□□ -0.13
LMNA-221ENST00000506981 MPDU1O75352 247 aa14.25□□□□□ -0.13
LMNA-221ENST00000506981 ACTL10Q5JWF8 245 aa14.25□□□□□ -0.13
LMNA-221ENST00000506981 UHRF2Q96PU4 802 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms