RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 LINC00869P0C866 280 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 ORM2P19652 201 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 SELENOTP62341 195 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 HBG1P69891 147 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 HBG2P69892 147 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 WFDC3Q8IUB2 231 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 FAM24BQ8N5W8 94 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 STXBP6Q8NFX7 210 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 SLC25A31Q9H0C2 315 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 DOK5Q9P104 306 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 SLC45A2Q9UMX9 530 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 WDR83OSQ9Y284 106 aa13.52□□□□□ -0.25
NPHP4-210ENST00000506941 RBMY1BA6NDE4 496 aaKnown RBP13.51□□□□□ -0.25
NPHP4-210ENST00000506941 RBMY1EA6NEQ0 496 aaKnown RBP13.51□□□□□ -0.25
NPHP4-210ENST00000506941 RBMY1DP0C7P1 496 aaKnown RBP13.51□□□□□ -0.25
NPHP4-210ENST00000506941 PET100P0DJ07 73 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 PAFAH1B2P68402 229 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 LINC00322Q6ZN03 302 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-210ENST00000506941 OR5C1Q8NGR4 320 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 OR1B1Q8NGR6 318 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 DCANP1Q8TF63 244 aa13.51□□□□□ -0.25
NPHP4-210ENST00000506941 TRAV2A0A0B4J234 112 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 HELTA6NFD8 242 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 K7EQG2 157 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 DNASE2O00115 360 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-210ENST00000506941 LYL1P12980 280 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 NUP62P37198 522 aaPredicted RBP13.5□□□□□ -0.25
NPHP4-210ENST00000506941 PLP1P60201 277 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 ZNF124Q15973 351 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 ATP6V1FQ16864 119 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 ZNF546Q86UE3 836 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 PPP1R14BQ96C90 147 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 FAM110AQ9BQ89 295 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
NPHP4-210ENST00000506941 CAMLGP49069 296 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 BAXQ07812 192 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 C1orf194Q5T5A4 169 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 PATE2Q6UY27 113 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 APRG1Q8IVJ8 170 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 GGTLC1Q9BX51 225 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 ARL6Q9H0F7 186 aa13.49□□□□□ -0.25
NPHP4-210ENST00000506941 ZNF98A6NK75 572 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 H3BRN7 92 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 HYPMO75409 117 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 GIPP09681 153 aaPredicted RBP13.48□□□□□ -0.25
NPHP4-210ENST00000506941 CLINT1Q14677 625 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 HAGHQ16775 308 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 Q5BKY6 102 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 LEMD1Q68G75 181 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 UHRF2Q96PU4 802 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 SCRT1Q9BWW7 348 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 SLC25A32Q9H2D1 315 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 PFDN2Q9UHV9 154 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 HIGD1AQ9Y241 93 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 HSPB11Q9Y547 144 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 STAB2Q8WWQ8 2551 aa13.48□□□□□ -0.25
NPHP4-210ENST00000506941 OR5G3P0C626 314 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 FGF7P21781 194 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 RPL12P30050 165 aaKnown RBP13.47□□□□□ -0.25
NPHP4-210ENST00000506941 AP2S1P53680 142 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-210ENST00000506941 OPCMLQ14982 345 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 MIC13Q5XKP0 118 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 THAP6Q8TBB0 222 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 SLC25A39Q9BZJ4 359 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-210ENST00000506941 SLC25A22Q9H936 323 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 NRN1Q9NPD7 142 aa13.47□□□□□ -0.25
NPHP4-210ENST00000506941 NHLRC4P0CG21 123 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-210ENST00000506941 PRR20EP86478 221 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 PRR20CP86479 221 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 PRR20DP86480 221 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 PRR20BP86481 221 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 PRR20AP86496 221 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 RAB31Q13636 194 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 OR8I2Q8N0Y5 310 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 C17orf77Q96MU5 243 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 TM2D3Q9BRN9 247 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 SHANK2-AS3Q9BTD1 123 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 FBXL17Q9UF56 701 aa13.46□□□□□ -0.25
NPHP4-210ENST00000506941 ZNF688P0C7X2 276 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 DEFB131AP59861 70 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 RAP2BP61225 183 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 PXDC1Q5TGL8 231 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 CHAC2Q8WUX2 184 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 ASB13Q8WXK3 278 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 TMEM37Q8WXS4 190 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 NPCDR1Q9BY65 106 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 ARV1Q9H2C2 271 aa13.45□□□□□ -0.26
NPHP4-210ENST00000506941 RPL29P47914 159 aaKnown RBP13.44□□□□□ -0.26
NPHP4-210ENST00000506941 CMC4P56277 68 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-210ENST00000506941 ATP5SQ99766 215 aa13.44□□□□□ -0.26
NPHP4-210ENST00000506941 SMIM3Q9BZL3 60 aa13.44□□□□□ -0.26
NPHP4-210ENST00000506941 LOC102724200A0A096LPH7 203 aaPredicted RBP13.43□□□□□ -0.26
NPHP4-210ENST00000506941 G3V3Q6 166 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 SOCS3O14543 225 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 COX7A2P2O60397 106 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 MPDU1O75352 247 aa13.43□□□□□ -0.26
NPHP4-210ENST00000506941 MORN5Q5VZ52 161 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms