RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
DSP-203ENST00000506617 TIMM9Q9Y5J7 89 aa11.2□□□□□ -0.62
DSP-203ENST00000506617 LINC00869P0C866 280 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 EIF2B2P49770 351 aaKnown RBP11.19□□□□□ -0.62
DSP-203ENST00000506617 USF2Q15853 346 aaPredicted RBP11.19□□□□□ -0.62
DSP-203ENST00000506617 TM4SF20Q53R12 229 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 C1orf194Q5T5A4 169 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 Q6ZRG5 221 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 ARPC5LQ9BPX5 153 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 SMIM3Q9BZL3 60 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 TMEM231Q9H6L2 316 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 RABAC1Q9UI14 185 aa11.19□□□□□ -0.62
DSP-203ENST00000506617 ZNF256Q9Y2P7 627 aaPredicted RBP11.19□□□□□ -0.62
DSP-203ENST00000506617 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 HYPMO75409 117 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 IGLV1-51P01701 117 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 HNRNPCP07910 306 aaKnown RBP eCLIP11.18□□□□□ -0.625e-12■■■■■ 38.8
DSP-203ENST00000506617 CXCL2P19875 107 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 TMEM182Q6ZP80 229 aaPredicted RBP11.18□□□□□ -0.62
DSP-203ENST00000506617 STPG3Q8N7X2 389 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 GNPNAT1Q96EK6 184 aaPredicted RBP11.18□□□□□ -0.62
DSP-203ENST00000506617 GRAMD2BQ96HH9 432 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 PFDN5Q99471 154 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 PSMG3Q9BT73 122 aaPredicted RBP11.18□□□□□ -0.62
DSP-203ENST00000506617 ARV1Q9H2C2 271 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 SLC39A9Q9NUM3 307 aa11.18□□□□□ -0.62
DSP-203ENST00000506617 CHEK1O14757 476 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 BCL2L11O43521 198 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 BUB3O43684 328 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 PFDN1O60925 122 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 C4BPBP20851 252 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 B2MP61769 119 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 EIF5AP63241 154 aaKnown RBP11.17□□□□□ -0.62
DSP-203ENST00000506617 SERF2P84101 59 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 OR1L4Q8NGR5 311 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 GATAD1Q8WUU5 269 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 RHPN1-AS1Q9BWJ2 59 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
DSP-203ENST00000506617 KANTRA0A1W2PQU2 76 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 EDN2P20800 178 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 GATA2P23769 480 aaPredicted RBP11.16□□□□□ -0.62
DSP-203ENST00000506617 LYZP61626 148 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 CD300CQ08708 224 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 DEFB114Q30KQ6 69 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 LGALSLQ3ZCW2 172 aaPredicted RBP11.16□□□□□ -0.62
DSP-203ENST00000506617 DEFB121Q5J5C9 76 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 TMUB2Q71RG4 321 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 ARL6Q9H0F7 186 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 DNAJC4Q9NNZ3 241 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 HIGD1AQ9Y241 93 aa11.16□□□□□ -0.62
DSP-203ENST00000506617 ORM2P19652 201 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 MIC13Q5XKP0 118 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 RPL7L1Q6DKI1 246 aaKnown RBP11.15□□□□□ -0.62
DSP-203ENST00000506617 LAMTOR1Q6IAA8 161 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 GPR82Q96P67 336 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 RNF2Q99496 336 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 PBDC1Q9BVG4 233 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 MLXQ9UH92 298 aa11.15□□□□□ -0.62
DSP-203ENST00000506617 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 HELTA6NFD8 242 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 COX7A2P2O60397 106 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 MBP02144 154 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 GP9P14770 177 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 FAM90A2PQ658T7 463 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 LCN12Q6JVE5 192 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 C16orf54Q6UWD8 224 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 C9orf62Q8N4C0 152 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 STOML3Q8TAV4 291 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 TMEM37Q8WXS4 190 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 TGP01266 2768 aa11.14□□□□□ -0.63
DSP-203ENST00000506617 TRAV2A0A0B4J234 112 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 TSPAN4O14817 238 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 ZNF207O43670 478 aaKnown RBP11.13□□□□□ -0.63
DSP-203ENST00000506617 APOHP02749 345 aaPredicted RBP11.13□□□□□ -0.63
DSP-203ENST00000506617 OR5G3P0C626 314 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 ATP6V0CP27449 155 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 C10orf113Q5VZT2 155 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 ST8SIA2Q92186 375 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 PPP1R14BQ96C90 147 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 RSG1Q9BU20 258 aa11.13□□□□□ -0.63
DSP-203ENST00000506617 SLC25A39Q9BZJ4 359 aaPredicted RBP11.13□□□□□ -0.63
DSP-203ENST00000506617 ZNF98A6NK75 572 aa11.12□□□□□ -0.63
DSP-203ENST00000506617 H3BRN7 92 aa11.12□□□□□ -0.63
DSP-203ENST00000506617 SPP1P10451 314 aa11.12□□□□□ -0.63
DSP-203ENST00000506617 CD300EQ496F6 205 aaPredicted RBP11.12□□□□□ -0.63
DSP-203ENST00000506617 HSD17B11Q8NBQ5 300 aa11.12□□□□□ -0.63
DSP-203ENST00000506617 SPAG8Q99932 426 aaPredicted RBP11.12□□□□□ -0.63
DSP-203ENST00000506617 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
DSP-203ENST00000506617 DNAH9Q9NYC9 4486 aa11.11□□□□□ -0.63
DSP-203ENST00000506617 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
DSP-203ENST00000506617 SEC11BP0C7V7 166 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms