RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 GUCA2BQ16661 112 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 DEFB114Q30KQ6 69 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 LINC01559Q495D7 138 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 CD300EQ496F6 205 aaPredicted RBP6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 LCN12Q6JVE5 192 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 STPG3Q8N7X2 389 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 OR11H4Q8NGC9 324 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 OR1L4Q8NGR5 311 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 ST8SIA2Q92186 375 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 HYLS1Q96M11 299 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 GGTLC1Q9BX51 225 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 WFDC1Q9HC57 220 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 KCNIP2Q9NS61 270 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 MLXQ9UH92 298 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 HIGD1AQ9Y241 93 aa6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 LSM4Q9Y4Z0 139 aaKnown RBP6.23□□□□□ -1.41
LIMCH1-206ENST00000505705 TENM1Q9UKZ4 2725 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 ELOA3CA0A087WX78 387 aaPredicted RBP6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 G3V3Q6 166 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 DNASE2O00115 360 aaPredicted RBP6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 IGLV1-51P01701 117 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 C1QBP02746 253 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 CD5P06127 495 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 C8orf88P0DMB2 117 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 RPL29P47914 159 aaKnown RBP6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 PAFAH1B2P68402 229 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 OPCMLQ14982 345 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 ZFP69Q49AA0 526 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 SAMD5Q5TGI4 173 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 PXDC1Q5TGL8 231 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 WFDC3Q8IUB2 231 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 OR8I2Q8N0Y5 310 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 HSD17B11Q8NBQ5 300 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 OR2K2Q8NGT1 345 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 RNF2Q99496 336 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 ARPC5LQ9BPX5 153 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 RSG1Q9BU20 258 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 SLC25A22Q9H936 323 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 DNAJC4Q9NNZ3 241 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 SLC39A9Q9NUM3 307 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 PXMP4Q9Y6I8 212 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 TRRAPQ9Y4A5 3859 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 DNHD1Q96M86 4753 aa6.22□□□□□ -1.41
LIMCH1-206ENST00000505705 STAB1Q9NY15 2570 aa6.21□□□□□ -1.41
LIMCH1-206ENST00000505705 JTBO76095 146 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 GP9P14770 177 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 TFPI2P48307 235 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 PLP1P60201 277 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF345Q14585 488 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 FFAR4Q5NUL3 377 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 RPL7L1Q6DKI1 246 aaKnown RBP6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 ADAMTSL5Q6ZMM2 481 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 TCF24Q7RTU0 167 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 LINC00305Q7Z4B0 112 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 GBGT1Q8N5D6 347 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 KCNRGQ8N5I3 272 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF414Q96IQ9 312 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 UHRF2Q96PU4 802 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 PFDN5Q99471 154 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 NEURL2Q9BR09 285 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 PARD6GQ9BYG4 376 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 SLC25A39Q9BZJ4 359 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 VSIRQ9H7M9 311 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 RNF24Q9Y225 148 aa6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF256Q9Y2P7 627 aaPredicted RBP6.21□□□□□ -1.42
LIMCH1-206ENST00000505705 TRAV25A0A0B4J276 109 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 HELTA6NFD8 242 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF98A6NK75 572 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF785A8K8V0 405 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 BUB3O43684 328 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 CXCL2P19875 107 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 C4BPBP20851 252 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 EIF5AP63241 154 aaKnown RBP6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 CD300CQ08708 224 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 ACOT6Q3I5F7 207 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 C1orf194Q5T5A4 169 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 LEMD1Q68G75 181 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 C16orf54Q6UWD8 224 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 SIGLEC15Q6ZMC9 328 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 TMUB2Q71RG4 321 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 GTSCR1Q86UQ5 136 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 TMEM61Q8N0U2 210 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 STXBP6Q8NFX7 210 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 GATAD1Q8WUU5 269 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 GNPNAT1Q96EK6 184 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 WNK1Q9H4A3 2382 aa6.2□□□□□ -1.42
LIMCH1-206ENST00000505705 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 IZUMO1RA6ND01 250 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 H3BRN7 92 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 TSPAN4O14817 238 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 BCL2L11O43521 198 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 ATF4P18848 351 aaPredicted RBP6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 ATP6V0CP27449 155 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 GALR1P47211 349 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 KRTAP10-11P60412 298 aa6.19□□□□□ -1.42
LIMCH1-206ENST00000505705 BEAN1Q3B7T3 259 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms