RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 PKHD1P08F94 4074 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 SMIM9A6NGZ8 99 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 M0R2N4 97 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 SPART-AS1P0CW21 52 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 LINC00336Q6ZUF6 198 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 TMED4Q7Z7H5 227 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 COQ8AQ8NI60 647 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 CLUHP3Q96NS8 147 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 TRGV9Q99603 122 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 BCL7BQ9BQE9 202 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 DKK2Q9UBU2 259 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 RFNGQ9Y644 331 aa8.71□□□□□ -1.02
SNHG4-202ENST00000505522 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 DUXBA0A1W2PPF3 345 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 TMEM189A5PLL7 270 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 H3BMQ9 156 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 ISLRO14498 428 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 RTL8CO15255 209 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 FABP1P07148 127 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 PAX9P55771 341 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 RAB11AP62491 216 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 PSG9Q00887 426 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 TMEM128Q5BJH2 165 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 FAM222AQ5U5X8 452 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 FAM78BQ5VT40 261 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 OR8I2Q8N0Y5 310 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 C1orf158Q8N1D5 194 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 THAP8Q8NA92 274 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 PPP1R14BQ96C90 147 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 C17orf77Q96MU5 243 aa8.7□□□□□ -1.02
SNHG4-202ENST00000505522 PAIP2BQ9ULR5 123 aaKnown RBP8.7□□□□□ -1.02
SNHG4-202ENST00000505522 A0A0J9YX75 114 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 PRSS46E5RG02 174 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 VAMP1P23763 118 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 SPATA31B1PQ5VZV4 182 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 EBLN2Q6P2I7 272 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 MAGT1Q9H0U3 335 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 SLC25A32Q9H2D1 315 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 KIAA1109Q2LD37 5005 aa8.69□□□□□ -1.02
SNHG4-202ENST00000505522 PRSS29PA6NIE9 313 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 WRBO00258 174 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 SLC25A6P12236 298 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 GATA2P23769 480 aaPredicted RBP8.68□□□□□ -1.02
SNHG4-202ENST00000505522 FAUP35544 74 aaKnown RBP8.68□□□□□ -1.02
SNHG4-202ENST00000505522 PYDC2Q56P42 97 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 TMEM182Q6ZP80 229 aaPredicted RBP8.68□□□□□ -1.02
SNHG4-202ENST00000505522 LRTM2Q8N967 370 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 MCFD2Q8NI22 146 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 C16orf92Q96LL3 132 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 NIPSNAP3BQ9BS92 247 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 RSG1Q9BU20 258 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 RPRMQ9NS64 109 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 GOLT1BQ9Y3E0 138 aa8.68□□□□□ -1.02
SNHG4-202ENST00000505522 PIGBOS1A0A0B4J2F0 54 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 TEX48A0A1B0GUV7 120 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 ZNF98A6NK75 572 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 A8MTW9 85 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 SYNGR2O43760 224 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 MED6O75586 246 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 HBE1P02100 147 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 HTN3P15516 51 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 GALR1P47211 349 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 PPP1R1AQ13522 171 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 LGALS9BQ3B8N2 356 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 GGNBP1Q5YKI7 109 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 AMTNQ6UX39 209 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 TOMM5Q8N4H5 51 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 C7orf50Q9BRJ6 194 aaKnown RBP8.67□□□□□ -1.02
SNHG4-202ENST00000505522 DOK5Q9P104 306 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 YTHDF2Q9Y5A9 579 aaKnown RBP8.67□□□□□ -1.02
SNHG4-202ENST00000505522 V9GYH0 126 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 PKD1P98161 4303 aa8.67□□□□□ -1.02
SNHG4-202ENST00000505522 IGLV2-18A0A075B6J9 118 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 NOL3O60936 208 aaKnown RBP8.66□□□□□ -1.02
SNHG4-202ENST00000505522 SFT2D2O95562 160 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 CFDP00746 253 aaPredicted RBP8.66□□□□□ -1.02
SNHG4-202ENST00000505522 IFNA21P01568 189 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 HOXB5P09067 269 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 ORM2P19652 201 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 MEOX2P50222 304 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 AP3S2P59780 193 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 RPP30P78346 268 aaKnown RBP8.66□□□□□ -1.02
SNHG4-202ENST00000505522 OXA1LQ15070 435 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 SPANXN5Q5MJ07 72 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 SAMD13Q5VXD3 122 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 UBE2DNLQ8IWF7 75 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 FAM210BQ96KR6 192 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 CIB3Q96Q77 187 aaPredicted RBP8.66□□□□□ -1.02
SNHG4-202ENST00000505522 SLC45A2Q9UMX9 530 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
SNHG4-202ENST00000505522 TRAV8-2A0A0B4J237 113 aa8.65□□□□□ -1.02
SNHG4-202ENST00000505522 H3BP45 60 aa8.65□□□□□ -1.02
SNHG4-202ENST00000505522 PRM2P04554 102 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms