RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 UBE2L5PA0A1B0GUS4 154 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 TSPAN4O14817 238 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 LINC00869P0C866 280 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 CAMLGP49069 296 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 LYZP61626 148 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 CLINT1Q14677 625 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 C16orf54Q6UWD8 224 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 RBPMS2Q6ZRY4 209 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 GRAMD2BQ96HH9 432 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 PRR25Q96S07 402 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 RNF2Q99496 336 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 PBDC1Q9BVG4 233 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 SELENOKQ9Y6D0 94 aa8.95□□□□□ -0.98
PDLIM5-208ENST00000504489 IGHV3-66A0A0C4DH42 116 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 BUB3O43684 328 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 DFFBO76075 338 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 PRB2P02812 416 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 FGF7P21781 194 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 S100A7P31151 101 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 OPCMLQ14982 345 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 GUCA2BQ16661 112 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 PXDC1Q5TGL8 231 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 TCF24Q7RTU0 167 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 STPG3Q8N7X2 389 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 INO80EQ8NBZ0 244 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 GLMPQ8WWB7 406 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 ATP5SQ99766 215 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 SPAG8Q99932 426 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 NEURL2Q9BR09 285 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 GGTLC1Q9BX51 225 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 TNFSF18Q9UNG2 199 aa8.94□□□□□ -0.98
PDLIM5-208ENST00000504489 FXYD6-FXYD2A0A087WZ82 144 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 K7EIL1 84 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 HYPMO75409 117 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 ORM2P19652 201 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 RPL29P47914 159 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 C1orf194Q5T5A4 169 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 WDR61Q9GZS3 305 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 ARL6Q9H0F7 186 aa8.93□□□□□ -0.98
PDLIM5-208ENST00000504489 RNF222A6NCQ9 220 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 HELTA6NFD8 242 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 IFNA5P01569 189 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 AP2S1P53680 142 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 MIC13Q5XKP0 118 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 Q6ZRG5 221 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 S100A7AQ86SG5 101 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 GTSCR1Q86UQ5 136 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 Q8N1Y9 231 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 PPP1R14BQ96C90 147 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 ST6GAL2Q96JF0 529 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 NPCDR1Q9BY65 106 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 PARD6GQ9BYG4 376 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 SMIM3Q9BZL3 60 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 HIGD1AQ9Y241 93 aa8.92□□□□□ -0.98
PDLIM5-208ENST00000504489 MEGF8Q7Z7M0 2845 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 OR4C46A6NHA9 309 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 ZNF98A6NK75 572 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SMLR1H3BR10 107 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 H3BRN7 92 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 OR5G3P0C626 314 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 PATE2Q6UY27 113 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 ZNF709Q8N972 641 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SCGB1C1Q8TD33 95 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SHANK2-AS3Q9BTD1 123 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SLC25A39Q9BZJ4 359 aaPredicted RBP8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 DNAJC4Q9NNZ3 241 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 SLC39A9Q9NUM3 307 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 DOK5Q9P104 306 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 FBXL17Q9UF56 701 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 RNF24Q9Y225 148 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 PXMP4Q9Y6I8 212 aa8.91□□□□□ -0.98
PDLIM5-208ENST00000504489 HMSDA8MTL9 139 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 C17orf112F2Z3M2 114 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 CD7P09564 240 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 CD81P60033 236 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 B2MP61769 119 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 TCTE3Q8IZS6 198 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 OR8I2Q8N0Y5 310 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 OR1L4Q8NGR5 311 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 MRAPQ8TCY5 172 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 TMEM37Q8WXS4 190 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 PFDN5Q99471 154 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 ARV1Q9H2C2 271 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 MS4A6AQ9H2W1 248 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 KCNIP2Q9NS61 270 aa8.9□□□□□ -0.98
PDLIM5-208ENST00000504489 hCG_2014768A0A024R1R8 64 aa8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 IGKV3-7A0A075B6H7 116 aa8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 DNASE2O00115 360 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 ARPC5O15511 151 aa8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 COX7A2P2O60397 106 aa8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 CMC4P56277 68 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 ZNF266Q14584 549 aa8.89□□□□□ -0.99
PDLIM5-208ENST00000504489 C10orf113Q5VZT2 155 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms