RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 SCGB1C1Q8TD33 95 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 B9D2Q9BPU9 175 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 RHPN1-AS1Q9BWJ2 59 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 GGTLC1Q9BX51 225 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 WDR61Q9GZS3 305 aaKnown RBP7.59□□□□□ -1.19
NUP54-203ENST00000504173 MFFQ9GZY8 342 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 TMEM231Q9H6L2 316 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 WFDC1Q9HC57 220 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 SMPXQ9UHP9 88 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 SLC45A2Q9UMX9 530 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 SELENOKQ9Y6D0 94 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 DNAH7Q8WXX0 4024 aa7.59□□□□□ -1.19
NUP54-203ENST00000504173 IGHV3-66A0A0C4DH42 116 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 A0A1W2PS18 150 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 HMSDA8MTL9 139 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 CHEK1O14757 476 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 IGLV1-51P01701 117 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 APOHP02749 345 aaPredicted RBP7.58□□□□□ -1.2
NUP54-203ENST00000504173 ORM2P19652 201 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 CRYBB3P26998 211 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 EIF2B2P49770 351 aaKnown RBP7.58□□□□□ -1.2
NUP54-203ENST00000504173 ZNF266Q14584 549 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 OPCMLQ14982 345 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 DEFB114Q30KQ6 69 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 MIC13Q5XKP0 118 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 STPG3Q8N7X2 389 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 ZNF709Q8N972 641 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 OR1B1Q8NGR6 318 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 ST8SIA2Q92186 375 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 PPP1R14BQ96C90 147 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 NPCDR1Q9BY65 106 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 ARL6Q9H0F7 186 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 KCNIP2Q9NS61 270 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 TECRQ9NZ01 308 aaKnown RBP7.58□□□□□ -1.2
NUP54-203ENST00000504173 DOK5Q9P104 306 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 MLXQ9UH92 298 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
NUP54-203ENST00000504173 C17orf112F2Z3M2 114 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 HYPMO75409 117 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 C1QBP02746 253 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 OR5G3P0C626 314 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 S100A7P31151 101 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 RPL29P47914 159 aaKnown RBP7.57□□□□□ -1.2
NUP54-203ENST00000504173 B2MP61769 119 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 ZNF345Q14585 488 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 CD300EQ496F6 205 aaPredicted RBP7.57□□□□□ -1.2
NUP54-203ENST00000504173 LCN12Q6JVE5 192 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 Q6ZRG5 221 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 OR2K2Q8NGT1 345 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 GRAMD2BQ96HH9 432 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 VSIRQ9H7M9 311 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 ZMAT5Q9UDW3 170 aaKnown RBP7.57□□□□□ -1.2
NUP54-203ENST00000504173 HIGD1AQ9Y241 93 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 PXMP4Q9Y6I8 212 aa7.57□□□□□ -1.2
NUP54-203ENST00000504173 BORCS7-ASMTA0A0B4J1R7 106 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 A0A0D9SG52 128 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 COX7A2P2O60397 106 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PLP1P60201 277 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PRR20EP86478 221 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PRR20CP86479 221 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PRR20DP86480 221 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PRR20BP86481 221 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PRR20AP86496 221 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 CD300CQ08708 224 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 LAMTOR1Q6IAA8 161 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 RBPMS2Q6ZRY4 209 aaKnown RBP7.56□□□□□ -1.2
NUP54-203ENST00000504173 S100A7AQ86SG5 101 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 KCNRGQ8N5I3 272 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 RNF2Q99496 336 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 ARPC5LQ9BPX5 153 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 PARD6GQ9BYG4 376 aaPredicted RBP7.56□□□□□ -1.2
NUP54-203ENST00000504173 SLC39A9Q9NUM3 307 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 U3KQE9 123 aa7.56□□□□□ -1.2
NUP54-203ENST00000504173 KANTRA0A1W2PQU2 76 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 IZUMO1RA6ND01 250 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 TAAR5O14804 337 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 PFDN1O60925 122 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 CXCL2P19875 107 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 RPL11P62913 178 aaKnown RBP7.55□□□□□ -1.2
NUP54-203ENST00000504173 EGFEM1PQ0D2K5 195 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 GUCA2BQ16661 112 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 ZFP69Q49AA0 526 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 TCF24Q7RTU0 167 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 TMEM61Q8N0U2 210 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 HSD17B11Q8NBQ5 300 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 OR1L4Q8NGR5 311 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 HYLS1Q96M11 299 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 PFDN5Q99471 154 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 NEURL2Q9BR09 285 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 ARV1Q9H2C2 271 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 ZNF256Q9Y2P7 627 aaPredicted RBP7.55□□□□□ -1.2
NUP54-203ENST00000504173 U3KQK5 164 aa7.55□□□□□ -1.2
NUP54-203ENST00000504173 ELOA3CA0A087WX78 387 aaPredicted RBP7.54□□□□□ -1.2
NUP54-203ENST00000504173 TRAV25A0A0B4J276 109 aa7.54□□□□□ -1.2
NUP54-203ENST00000504173 ZNF98A6NK75 572 aa7.54□□□□□ -1.2
NUP54-203ENST00000504173 H3BRN7 92 aa7.54□□□□□ -1.2
NUP54-203ENST00000504173 BUB3O43684 328 aa7.54□□□□□ -1.2
NUP54-203ENST00000504173 CD5P06127 495 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms