RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
SCLT1-205ENST00000503401 FGF7P21781 194 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 CD300CQ08708 224 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 ATP6V1FQ16864 119 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 WFDC3Q8IUB2 231 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 ASB13Q8WXK3 278 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 GRAMD2BQ96HH9 432 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 SLC45A2Q9UMX9 530 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 COL7A1Q02388 2944 aa12.34□□□□□ -0.43
SCLT1-205ENST00000503401 SMLR1H3BR10 107 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.43
SCLT1-205ENST00000503401 CAMLGP49069 296 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 SELENOTP62341 195 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 FGL1Q08830 312 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 ZNF546Q86UE3 836 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 ARL6Q9H0F7 186 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 SMAD5-AS1Q9Y6J3 95 aa12.33□□□□□ -0.43
SCLT1-205ENST00000503401 G3V3Q6 166 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 OR5G3P0C626 314 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 MIC13Q5XKP0 118 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 AKAP14Q86UN6 197 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 STXBP6Q8NFX7 210 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 UHRF2Q96PU4 802 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 MS4A6AQ9H2W1 248 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 UBQLN2Q9UHD9 624 aa12.33□□□□□ -0.44
SCLT1-205ENST00000503401 FXYD6-FXYD2A0A087WZ82 144 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 PFDN1O60925 122 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 HYPMO75409 117 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 IGHV4-30-4P0DP06 118 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 RAB31Q13636 194 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 LEMD1Q68G75 181 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 DEFB125Q8N687 156 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 SLC25A22Q9H936 323 aa12.32□□□□□ -0.44
SCLT1-205ENST00000503401 OR11H12B2RN74 326 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 DNASE2O00115 360 aaPredicted RBP12.31□□□□□ -0.44
SCLT1-205ENST00000503401 PATE2Q6UY27 113 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 TCTE3Q8IZS6 198 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 ATP5SQ99766 215 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 SCRT1Q9BWW7 348 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 HIGD1AQ9Y241 93 aa12.31□□□□□ -0.44
SCLT1-205ENST00000503401 OR4C46A6NHA9 309 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 ZNF98A6NK75 572 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 CD5P06127 495 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 PLP1P60201 277 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 OPCMLQ14982 345 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 SIGLEC15Q6ZMC9 328 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 FAM24BQ8N5W8 94 aa12.3□□□□□ -0.44
SCLT1-205ENST00000503401 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
SCLT1-205ENST00000503401 HELTA6NFD8 242 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 NUP62P37198 522 aaPredicted RBP12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PAFAH1B2P68402 229 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PRR20EP86478 221 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PRR20CP86479 221 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PRR20DP86480 221 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PRR20BP86481 221 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PRR20AP86496 221 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 ODF3L2Q3SX64 289 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 OR8I2Q8N0Y5 310 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 WDR61Q9GZS3 305 aaKnown RBP12.29□□□□□ -0.44
SCLT1-205ENST00000503401 ARV1Q9H2C2 271 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PFDN2Q9UHV9 154 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
SCLT1-205ENST00000503401 H3BRN7 92 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 MPDU1O75352 247 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 FRMD6-AS1P0C7T7 363 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 B2MP61769 119 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 TMEM37Q8WXS4 190 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 AQP10Q96PS8 301 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 SLC25A32Q9H2D1 315 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 SLC39A9Q9NUM3 307 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 FBXL17Q9UF56 701 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 PXMP4Q9Y6I8 212 aa12.29□□□□□ -0.44
SCLT1-205ENST00000503401 RNF222A6NCQ9 220 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 RPL29P47914 159 aaKnown RBP12.28□□□□□ -0.44
SCLT1-205ENST00000503401 AP2S1P53680 142 aaPredicted RBP12.28□□□□□ -0.44
SCLT1-205ENST00000503401 ZNF124Q15973 351 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 C1orf194Q5T5A4 169 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 Q6ZRG5 221 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 DCANP1Q8TF63 244 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 TUBA4BQ9H853 241 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 SRD5A3Q9H8P0 318 aa12.28□□□□□ -0.44
SCLT1-205ENST00000503401 GCSAMLQ5JQS6 135 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 MORN5Q5VZ52 161 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 LINC00305Q7Z4B0 112 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 APRG1Q8IVJ8 170 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 INO80EQ8NBZ0 244 aaPredicted RBP12.27□□□□□ -0.44
SCLT1-205ENST00000503401 FAM210AQ96ND0 272 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 CITED4Q96RK1 184 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 ASCL2Q99929 193 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 RSG1Q9BU20 258 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 TNFSF18Q9UNG2 199 aa12.27□□□□□ -0.44
SCLT1-205ENST00000503401 RFNGQ9Y644 331 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms