RNA–Protein interactions for RNA: ENST00000503030.1

TSPAN17-203, Transcript of tetraspanin 17, humanhuman

TSL 3

Gene TSPAN17, Length 909 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-203ENST00000503030 LINC00869P0C866 280 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 SELENOTP62341 195 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 EWSR1Q01844 656 aaKnown RBP eCLIP12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 NHLH2Q02577 135 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 ODF3L2Q3SX64 289 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 SBSPONQ8IVN8 264 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 RNF126Q9BV68 326 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 TMEM147Q9BVK8 224 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 MBD2Q9UBB5 411 aa12.53□□□□□ -0.4
TSPAN17-203ENST00000503030 AGPAT2O15120 278 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 BAXQ07812 192 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 ZNF546Q86UE3 836 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 STPG3Q8N7X2 389 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 MGST2Q99735 147 aa12.52□□□□□ -0.41
TSPAN17-203ENST00000503030 OR5G3P0C626 314 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 AP2S1P53680 142 aaPredicted RBP12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 APRG1Q8IVJ8 170 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 OR5C1Q8NGR4 320 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 WDR83OSQ9Y284 106 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 COL7A1Q02388 2944 aa12.51□□□□□ -0.41
TSPAN17-203ENST00000503030 TRAV2A0A0B4J234 112 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 RBMY1BA6NDE4 496 aaKnown RBP12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 RBMY1EA6NEQ0 496 aaKnown RBP12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 HYPMO75409 117 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 RBMY1DP0C7P1 496 aaKnown RBP12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 CAMLGP49069 296 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 RAP2BP61225 183 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 RAB31Q13636 194 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 CLINT1Q14677 625 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 ZNF124Q15973 351 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 ATP6V1FQ16864 119 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 VWC2Q2TAL6 325 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 CITED4Q96RK1 184 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 ARL6Q9H0F7 186 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 SLC45A2Q9UMX9 530 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 HIGD1AQ9Y241 93 aa12.5□□□□□ -0.41
TSPAN17-203ENST00000503030 K7EQG2 157 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 NHLRC4P0CG21 123 aaPredicted RBP12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 FGF7P21781 194 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 HAGHQ16775 308 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 C1orf194Q5T5A4 169 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 LEMD1Q68G75 181 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 THAP6Q8TBB0 222 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 SCRT1Q9BWW7 348 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 GGTLC1Q9BX51 225 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
TSPAN17-203ENST00000503030 ZNF98A6NK75 572 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 ZNF688P0C7X2 276 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 RPL12P30050 165 aaKnown RBP12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 S100A7P31151 101 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 DEFB131AP59861 70 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 PLP1P60201 277 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 UHRF2Q96PU4 802 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 FAM110AQ9BQ89 295 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 SLC25A39Q9BZJ4 359 aaPredicted RBP12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
TSPAN17-203ENST00000503030 HUWE1Q7Z6Z7 4374 aaKnown RBP12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 LOC102724200A0A096LPH7 203 aaPredicted RBP12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 H3BRN7 92 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 COX7A2P2O60397 106 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 GIPP09681 153 aaPredicted RBP12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 LINC00322Q6ZN03 302 aaPredicted RBP12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 SMIM3Q9BZL3 60 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 ARV1Q9H2C2 271 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 SLC25A32Q9H2D1 315 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 HSPB11Q9Y547 144 aa12.47□□□□□ -0.41
TSPAN17-203ENST00000503030 LYL1P12980 280 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 RPL35AP18077 110 aaKnown RBP12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 PXDC1Q5TGL8 231 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 PATE2Q6UY27 113 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 Q6ZRG5 221 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 SHANK2-AS3Q9BTD1 123 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 ZMAT4Q9H898 229 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 U3KQK5 164 aa12.46□□□□□ -0.41
TSPAN17-203ENST00000503030 MPDU1O75352 247 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 GALR1P47211 349 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 FGL1Q08830 312 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 OPCMLQ14982 345 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 PSMG4Q5JS54 123 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 ATP5SQ99766 215 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 RSG1Q9BU20 258 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 PXMP4Q9Y6I8 212 aa12.45□□□□□ -0.42
TSPAN17-203ENST00000503030 RPL29P47914 159 aaKnown RBP12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 B2MP61769 119 aa12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 SNRPD3P62318 126 aaKnown RBP12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 PRR20EP86478 221 aa12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 PRR20CP86479 221 aa12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 PRR20DP86480 221 aa12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 PRR20BP86481 221 aa12.44□□□□□ -0.42
TSPAN17-203ENST00000503030 PRR20AP86496 221 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms