RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 Q71RC1 249 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 PPP1R32Q7Z5V6 425 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 WNK2Q9Y3S1 2297 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 TMSB15BA0A087X1C1 80 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 CCDC144NLQ6NUI1 221 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 LINC00305Q7Z4B0 112 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 PRNTQ86SH4 94 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 BCL6BQ8N143 479 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 EPDR1Q9UM22 224 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 DMXL2Q8TDJ6 3036 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 FGF6P10767 208 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 IFI27L2Q9H2X8 130 aa10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 SPTAN1Q13813 2472 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-220ENST00000497580 CYC1P08574 325 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 FXYD2P54710 66 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 NRN1LQ496H8 165 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 ABHD17BQ5VST6 288 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 CNEP1R1Q8N9A8 125 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 NKX2-8O15522 239 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 ARMS2P0C7Q2 107 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 SAA2P0DJI9 122 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 PRDX2P32119 198 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 C19orf24Q9BVV8 132 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 LINC00470Q9BZP3 86 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 INSIG2Q9Y5U4 225 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 SMIM17P0DL12 118 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 OR2Z1Q8NG97 314 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 SIT1Q9Y3P8 196 aa10.57□□□□□ -0.72
GAPVD1-220ENST00000497580 CFHR2P36980 270 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 KLF14Q8TD94 323 aaPredicted RBP10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 TMEM14BQ9NUH8 114 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 C10orf142B7Z368 130 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 IGKV1-16P04430 117 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 Q0VFX4 171 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 ZNF766Q5HY98 468 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 ZNF414Q96IQ9 312 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 MRPL32Q9BYC8 188 aaKnown RBP10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 BOKQ9UMX3 212 aaPredicted RBP10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 H3BMG7 143 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 PPIFP30405 207 aaKnown RBP10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 LCNL1Q6ZST4 164 aa10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 FOXA2Q9Y261 457 aaPredicted RBP10.56□□□□□ -0.72
GAPVD1-220ENST00000497580 ACACAQ13085 2346 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 FAM90A9PA6NNJ1 464 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 SLC25A17O43808 307 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 CD69Q07108 199 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 C10orf55Q5SWW7 151 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 FAM201AQ5SY85 155 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 DEFB108BQ8NET1 73 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 MGAQ8IWI9 3026 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 INSL3P51460 131 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 SAP25Q8TEE9 199 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 ITLN1Q8WWA0 313 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 GEMIN7Q9H840 131 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 NDFIP1Q9BT67 221 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
GAPVD1-220ENST00000497580 INO80CQ6PI98 192 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 PATE2Q6UY27 113 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 COL25A1Q9BXS0 654 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 A0A1W2PRD5 423 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 A0A1W2PRF3 423 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 A0A1W2PRM7 423 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 LTAP01374 205 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 OR4X2Q8NGF9 303 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 VGLL1Q99990 258 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 DKK2Q9UBU2 259 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 JPT1Q9UK76 154 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 IGKV3D-15A0A087WSY6 115 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 CT45A1Q5HYN5 189 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 C11orf53Q8IXP5 236 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 TMEM105Q8N8V8 129 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 CT45A3Q8NHU0 189 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 CALYQ9NYX4 217 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 B4GALT7Q9UBV7 327 aa10.54□□□□□ -0.72
GAPVD1-220ENST00000497580 A0A1B0GUT8 65 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 SRRM4A7MD48 611 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 RNASE2P10153 161 aaKnown RBP10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 ATP1A1-AS1Q5TC04 95 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 OR1L4Q8NGR5 311 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 SPAG8Q99932 426 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 LY6G6EA0A0G2JKS1 128 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 D6R8Y8 96 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 WISP2O76076 250 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 MC5RP33032 325 aa10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 PEAR1Q5VY43 1037 aaPredicted RBP10.53□□□□□ -0.72
GAPVD1-220ENST00000497580 U3KQA8 63 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms