RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 FAM222AQ5U5X8 452 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 PPP1R14BQ96C90 147 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 C20orf173Q96LM9 149 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 SCGB3A2Q96PL1 93 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 DKK2Q9UBU2 259 aa9.28□□□□□ -0.92
USF1-207ENST00000496363 IGLV2-18A0A075B6J9 118 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 TMEM189A5PLL7 270 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 SMIM9A6NGZ8 99 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 PITX3O75364 302 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 HTN3P15516 51 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 C1orf194Q5T5A4 169 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 FAM78BQ5VT40 261 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 C1orf158Q8N1D5 194 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 RABL2AQ9UBK7 228 aaPredicted RBP9.27□□□□□ -0.93
USF1-207ENST00000496363 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 PAIP2BQ9ULR5 123 aaKnown RBP9.27□□□□□ -0.93
USF1-207ENST00000496363 RABL2BQ9UNT1 228 aa9.27□□□□□ -0.93
USF1-207ENST00000496363 A0A0J9YX75 114 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 SNRPGP15A8MWD9 76 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 ANXA3P12429 323 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 PAX9P55771 341 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 ATP5IP56385 69 aaPredicted RBP9.26□□□□□ -0.93
USF1-207ENST00000496363 SRPXP78539 464 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 PSG9Q00887 426 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 UBE2DNLQ8IWF7 75 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 OR8I2Q8N0Y5 310 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 THAP8Q8NA92 274 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 RAB2BQ8WUD1 216 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 TRGV9Q99603 122 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 C7orf50Q9BRJ6 194 aaKnown RBP9.26□□□□□ -0.93
USF1-207ENST00000496363 NIPSNAP3BQ9BS92 247 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 SLC25A32Q9H2D1 315 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 RSL24D1Q9UHA3 163 aaKnown RBP9.26□□□□□ -0.93
USF1-207ENST00000496363 GOLT1BQ9Y3E0 138 aa9.26□□□□□ -0.93
USF1-207ENST00000496363 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 LOC102723971A0A1B0GUV8 181 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 ISLRO14498 428 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 FABP1P07148 127 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 TNFSF8P32971 234 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 RAB11AP62491 216 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 LGALS9BQ3B8N2 356 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 SLIRPQ9GZT3 109 aaKnown RBP9.25□□□□□ -0.93
USF1-207ENST00000496363 MAGT1Q9H0U3 335 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 SLC25A22Q9H936 323 aa9.25□□□□□ -0.93
USF1-207ENST00000496363 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
USF1-207ENST00000496363 FABP12A6NFH5 140 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 IFNA21P01568 189 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 HBE1P02100 147 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 PRM2P04554 102 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
USF1-207ENST00000496363 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 IGFL4Q6B9Z1 124 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 TMEM182Q6ZP80 229 aaPredicted RBP9.24□□□□□ -0.93
USF1-207ENST00000496363 TRIM63Q969Q1 353 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 RSG1Q9BU20 258 aa9.24□□□□□ -0.93
USF1-207ENST00000496363 DUXBA0A1W2PPF3 345 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 ZNF98A6NK75 572 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 PRSS46E5RG02 174 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 VAMP1P23763 118 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 GALR1P47211 349 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 TMBIM6P55061 237 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 AMTNQ6UX39 209 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 Q6ZR54 194 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 FAM210BQ96KR6 192 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 RPRMQ9NS64 109 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 DOK5Q9P104 306 aa9.23□□□□□ -0.93
USF1-207ENST00000496363 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 A8MTW9 85 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 H3BMQ9 156 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 H3BP45 60 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 WRBO00258 174 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 MED14OSP0DP75 135 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 ORM2P19652 201 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 TMEM128Q5BJH2 165 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 MCFD2Q8NI22 146 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 BCL7BQ9BQE9 202 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 TMEM208Q9BTX3 173 aa9.22□□□□□ -0.93
USF1-207ENST00000496363 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 ZNF705GA8MUZ8 300 aaPredicted RBP9.21□□□□□ -0.94
USF1-207ENST00000496363 M0R2Z0 102 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 SYNGR2O43760 224 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 MED6O75586 246 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 HOXB5P09067 269 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 SLC25A6P12236 298 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 FAUP35544 74 aaKnown RBP9.21□□□□□ -0.94
USF1-207ENST00000496363 MEOX2P50222 304 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 CNN1P51911 297 aaKnown RBP9.21□□□□□ -0.94
USF1-207ENST00000496363 DAD1P61803 113 aa9.21□□□□□ -0.94
USF1-207ENST00000496363 PPP1R1AQ13522 171 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms