RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 NUMA1Q14980 2115 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 LOC400499M0QZD8 3231 aa2.77□□□□□ -1.97
SMC2-205ENST00000493955 H3BT86 120 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 NOS1APO75052 506 aaPredicted RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 CNIH1O95406 144 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 HAND1O96004 215 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 HMGA1P17096 107 aaKnown RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 HSD11B1P28845 292 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 TPI1P60174 286 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 HES1Q14469 280 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 CDK10Q15131 360 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 ZNF705AQ6ZN79 300 aaPredicted RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 DEFB119Q8N690 84 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 MRPL30Q8TCC3 161 aaKnown RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 ACOT12Q8WYK0 555 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 TRIM4Q9C037 500 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 COMMD5Q9GZQ3 224 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 TLNRD1Q9H1K6 362 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 IL36BQ9NZH7 164 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 PRO2289Q9P1D8 64 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 PKD1L2Q7Z442 2459 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 ASPMQ8IZT6 3477 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 ZFYVE26Q68DK2 2539 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 MALRD1Q5VYJ5 2156 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 C1QAP02745 245 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 PRM2P04554 102 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 RPL28P46779 137 aaKnown RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 RAB14P61106 215 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 HIST1H3AP68431 136 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 BASP1P80723 227 aaKnown RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 H3F3AP84243 136 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 CCDC94Q9BW85 323 aaPredicted RBP2.76□□□□□ -1.97
SMC2-205ENST00000493955 TTTY12Q9BZ98 90 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 DOK5Q9P104 306 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 NAT8Q9UHE5 227 aa2.76□□□□□ -1.97
SMC2-205ENST00000493955 BPTFQ12830 3046 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 DMXL2Q8TDJ6 3036 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 FASNP49327 2511 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 IGHV3-64A0A075B6Q5 118 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 LGALS1P09382 135 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 MSNP26038 577 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 HLA-DMBP28068 263 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 EMP1P54849 157 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 RPS20P60866 119 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 CCL20P78556 96 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 ERHP84090 104 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 RPL18Q07020 188 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 TSTD1Q8NFU3 115 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 OR8B12Q8NGG6 310 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 DGCR14Q96DF8 476 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 CMSS1Q9BQ75 279 aaKnown RBP2.75□□□□□ -1.97
SMC2-205ENST00000493955 OR8D2Q9GZM6 311 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 FBXL12Q9NXK8 326 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 NBEAQ8NFP9 2946 aa2.75□□□□□ -1.97
SMC2-205ENST00000493955 HEATR5AQ86XA9 2040 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 TRAV26-2A0A0B4J265 109 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 A0A0G2JQZ4 141 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 FAM236DA0A1B0GTK5 79 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 RFPL4AA6NLU0 287 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 RFPL4AL1F8VTS6 287 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 PIRO00625 290 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 P0DMU3 169 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 FAM231AP0DMU4 169 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 FAM231CP0DMU5 169 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 FAM236CP0DP71 79 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 IAH1Q2TAA2 248 aaPredicted RBP2.74□□□□□ -1.97
SMC2-205ENST00000493955 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 TSPAN32Q96QS1 320 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 KLF6Q99612 283 aaPredicted RBP2.74□□□□□ -1.97
SMC2-205ENST00000493955 NIPSNAP1Q9BPW8 284 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 ARL2BPQ9Y2Y0 163 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 TIMM22Q9Y584 194 aa2.74□□□□□ -1.97
SMC2-205ENST00000493955 NCKAP5O14513 1909 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 TRAV7A0A075B6U4 112 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 ARRDC5A6NEK1 342 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 GGT3PA6NGU5 568 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 H7C2G1 150 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 CRYZL1O95825 349 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 SERPINA7P05543 415 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 CAPZBP47756 277 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 HBA1P69905 142 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 TMED2Q15363 201 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 Q6ZTI0 123 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 ZNF676Q8N7Q3 588 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 SLC7A6Q92536 515 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 TXNDC17Q9BRA2 123 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 TMEM56-RWDD3S4R434 201 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 APC2O95996 2303 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 FREM2Q5SZK8 3169 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 ITPR1Q14643 2758 aa2.73□□□□□ -1.97
SMC2-205ENST00000493955 CELSR3Q9NYQ7 3312 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 GOLGA4Q13439 2230 aaKnown RBP2.72□□□□□ -1.97
SMC2-205ENST00000493955 TMSB15BA0A087X1C1 80 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 TRAV38-1A0A0B4J264 116 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 H3BRN7 92 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 SULT1A3P0DMM9 295 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 SULT1A4P0DMN0 295 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 PEBP1P30086 187 aaKnown RBP2.72□□□□□ -1.97
SMC2-205ENST00000493955 DEFA1P59665 94 aa2.72□□□□□ -1.97
SMC2-205ENST00000493955 HIST1H4AP62805 103 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms