RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 PPP1R1AQ13522 171 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 KRTAP27-1Q3LI81 207 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 KCTD18Q6PI47 426 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-222ENST00000493919 FAM213BQ8TBF2 198 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 C2orf50Q96LR7 162 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 LINC01587Q99440 93 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 FOXC2Q99958 501 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 C1QTNF5Q9BXJ0 243 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 ITPR3Q14573 2671 aa9.42□□□□□ -0.9
BRCA1-222ENST00000493919 IGLV3-9A0A075B6K5 115 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF816-ZNF321PA0A0X1KG74 233 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 SH2D1BO14796 132 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 IGHV4-39P01824 125 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 SCTP09683 121 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 KIR2DS2P43631 304 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 MALLQ13021 153 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 FAM57BQ71RH2 274 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 OR5AS1Q8N127 324 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 KCNS1Q96KK3 526 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 RABAC1Q9UI14 185 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 C5orf63A6NC05 138 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 FAM90A26D6RGX4 464 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 IGHV3-13P01766 116 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 OR4C13Q8NGP0 309 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
BRCA1-222ENST00000493919 ZNF488Q96MN9 340 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 ATP5SQ99766 215 aa9.41□□□□□ -0.9
BRCA1-222ENST00000493919 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.9
BRCA1-222ENST00000493919 PRSS29PA6NIE9 313 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 CXorf1O96002 111 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 TMEM86BQ8N661 226 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 WFDC11Q8NEX6 87 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 OR5D14Q8NGL3 314 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 SCGB1C1Q8TD33 95 aa9.4□□□□□ -0.9
BRCA1-222ENST00000493919 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.91
BRCA1-222ENST00000493919 SPRY3O43610 288 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 PAGE4O60829 102 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 ZNF737O75373 536 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 SGPP2Q8IWX5 399 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 SGMS2Q8NHU3 365 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 Q96MF0 132 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 MLST8Q9BVC4 326 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 CXXC4Q9H2H0 198 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 LOC107984640A0A0U1RRK4 108 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 C17orf100A8MU93 164 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 IL3RAP26951 378 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 ADMP35318 185 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 EFNA4P52798 201 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 RBM11P57052 281 aaKnown RBP9.39□□□□□ -0.91
BRCA1-222ENST00000493919 IL15RAQ13261 267 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 TAL2Q16559 108 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 OR10J6PQ8NGY7 276 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 RASL10AQ92737 203 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 LINC00477Q96M19 166 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 OR10A2Q9H208 303 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 SH3BGRL3Q9H299 93 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 VSIG4Q9Y279 399 aa9.39□□□□□ -0.91
BRCA1-222ENST00000493919 TRBV9A0A0B4J1U6 114 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 DAPL1A0PJW8 107 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A18PA6NE21 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A16PA6NEW6 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A9PA6NNJ1 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A5PA8MXJ8 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 TNFSF12O43508 249 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 CD3DP04234 171 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 CD55P08174 381 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A15PP0C7V4 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FAM90A14PP0C7W9 464 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 GATA2P23769 480 aaPredicted RBP9.38□□□□□ -0.91
BRCA1-222ENST00000493919 CNTFRP26992 372 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 CCL8P80075 99 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 ZNF695Q8IW36 515 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 WNT10AQ9GZT5 417 aa9.38□□□□□ -0.91
BRCA1-222ENST00000493919 PARP12Q9H0J9 701 aaKnown RBP9.38□□□□□ -0.91
BRCA1-222ENST00000493919 FCGR3BO75015 233 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 ZNF324O75467 553 aaPredicted RBP9.37□□□□□ -0.91
BRCA1-222ENST00000493919 ATP5LO75964 103 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 CA2P00918 260 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 MYOD1P15172 320 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
BRCA1-222ENST00000493919 PRSS3P35030 304 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 RPL31P62899 125 aaKnown RBP9.37□□□□□ -0.91
BRCA1-222ENST00000493919 SAMD5Q5TGI4 173 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 PELI1Q96FA3 418 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 C1orf123Q9NWV4 160 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 SYS1-DBNDD2H3BUS1 97 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 CRLF1O75462 422 aa9.37□□□□□ -0.91
BRCA1-222ENST00000493919 IGHV1-46P01743 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms