RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
COL9A1-210ENST00000493682 A0A0B4J2A0 478 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 F6UB75 175 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 ISLRO14498 428 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 PAX9P55771 341 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 ATP5IP56385 69 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-210ENST00000493682 OXA1LQ15070 435 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 RNF212Q495C1 297 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 FAM78BQ5VT40 261 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 CLVS1Q8IUQ0 354 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-210ENST00000493682 SLC35E1Q96K37 410 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 SHPKQ9UHJ6 478 aa12.33□□□□□ -0.44
COL9A1-210ENST00000493682 YTHDF2Q9Y5A9 579 aaKnown RBP12.33□□□□□ -0.44
COL9A1-210ENST00000493682 A0A0J9YX75 114 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 LOC102723971A0A1B0GUV8 181 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 SNRPGP15A8MWD9 76 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 CTDSPLO15194 276 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 HBE1P02100 147 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 FABP1P07148 127 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 SMIM18P0DKX4 95 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 OR2F1Q13607 317 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 EBLN2Q6P2I7 272 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 OR8I2Q8N0Y5 310 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 PPP1R14BQ96C90 147 aa12.32□□□□□ -0.44
COL9A1-210ENST00000493682 C7orf50Q9BRJ6 194 aaKnown RBP12.32□□□□□ -0.44
COL9A1-210ENST00000493682 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
COL9A1-210ENST00000493682 AKR1C4P17516 323 aa12.31□□□□□ -0.44
COL9A1-210ENST00000493682 SOHLH1Q5JUK2 328 aa12.31□□□□□ -0.44
COL9A1-210ENST00000493682 TMEM88Q6PEY1 159 aa12.31□□□□□ -0.44
COL9A1-210ENST00000493682 ZNF575Q86XF7 245 aa12.31□□□□□ -0.44
COL9A1-210ENST00000493682 C20orf173Q96LM9 149 aa12.31□□□□□ -0.44
COL9A1-210ENST00000493682 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 IL18Q14116 193 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 RRN3P1Q2M238 152 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 SAMD13Q5VXD3 122 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 OR1S1Q8NH92 325 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 SCGB3A2Q96PL1 93 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 TRGV9Q99603 122 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 RPRMQ9NS64 109 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 MUC4Q99102 2169 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 DNAH11Q96DT5 4516 aa12.3□□□□□ -0.44
COL9A1-210ENST00000493682 IGKV1OR2-108A0A075B7D4 117 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 A8MTW9 85 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 DAD1P61803 113 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 SPCS2Q15005 226 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 C1orf134Q5TEV5 83 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 DIRAS2Q96HU8 199 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 C16orf92Q96LL3 132 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 MAGT1Q9H0U3 335 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 DOK5Q9P104 306 aa12.29□□□□□ -0.44
COL9A1-210ENST00000493682 MEOX2P50222 304 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 SRPXP78539 464 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 AMTNQ6UX39 209 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 THAP8Q8NA92 274 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 IGF2BP2-AS1Q96M15 143 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 KRTAP4-5Q9BYR2 181 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 MCUBQ9NWR8 336 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 RABL2AQ9UBK7 228 aaPredicted RBP12.28□□□□□ -0.44
COL9A1-210ENST00000493682 RABL2BQ9UNT1 228 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 ABCA13Q86UQ4 5058 aa12.28□□□□□ -0.44
COL9A1-210ENST00000493682 PITX3O75364 302 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 IAPPP10997 89 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 ANXA3P12429 323 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 GALR1P47211 349 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 RAB11AP62491 216 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 C17orf77Q96MU5 243 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 TMEM208Q9BTX3 173 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 RSG1Q9BU20 258 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 SLC25A32Q9H2D1 315 aa12.27□□□□□ -0.45
COL9A1-210ENST00000493682 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
COL9A1-210ENST00000493682 SLC25A22Q9H936 323 aa12.26□□□□□ -0.45
COL9A1-210ENST00000493682 PAIP2BQ9ULR5 123 aaKnown RBP12.26□□□□□ -0.45
COL9A1-210ENST00000493682 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
COL9A1-210ENST00000493682 ZNF98A6NK75 572 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 LCE2BO14633 110 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 CFDP00746 253 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-210ENST00000493682 PRM2P04554 102 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 FAM3BP58499 235 aaPredicted RBP12.25□□□□□ -0.45
COL9A1-210ENST00000493682 GGNBP1Q5YKI7 109 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 RSL24D1Q9UHA3 163 aaKnown RBP12.25□□□□□ -0.45
COL9A1-210ENST00000493682 SLC45A2Q9UMX9 530 aa12.25□□□□□ -0.45
COL9A1-210ENST00000493682 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
COL9A1-210ENST00000493682 ALDH3B2P48448 385 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 CNN1P51911 297 aaKnown RBP12.24□□□□□ -0.45
COL9A1-210ENST00000493682 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 OR11H7Q8NGC8 314 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 OR4D5Q8NGN0 318 aa12.24□□□□□ -0.45
COL9A1-210ENST00000493682 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
COL9A1-210ENST00000493682 M0R2Z0 102 aa12.23□□□□□ -0.45
COL9A1-210ENST00000493682 CRXO43186 299 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-210ENST00000493682 ORM2P19652 201 aa12.23□□□□□ -0.45
COL9A1-210ENST00000493682 SPINK13Q1W4C9 94 aa12.23□□□□□ -0.45
COL9A1-210ENST00000493682 IGFL4Q6B9Z1 124 aa12.23□□□□□ -0.45
COL9A1-210ENST00000493682 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
COL9A1-210ENST00000493682 OR1B1Q8NGR6 318 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms