RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 BOLA2-SMG1P6H3BVE0 249 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 ATP6V0CP27449 155 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 RPL29P47914 159 aaKnown RBP11.95□□□□□ -0.5
HPS4-216ENST00000493455 PRR20EP86478 221 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 PRR20CP86479 221 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 PRR20DP86480 221 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 PRR20BP86481 221 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 PRR20AP86496 221 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 GCSAMLQ5JQS6 135 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 WFDC9Q8NEX5 89 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 PARD6GQ9BYG4 376 aaPredicted RBP11.95□□□□□ -0.5
HPS4-216ENST00000493455 SH3BGRL3Q9H299 93 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 CYTL1Q9NRR1 136 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 MLXQ9UH92 298 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
HPS4-216ENST00000493455 CHEK1O14757 476 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 JTBO76095 146 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 RPL11P62913 178 aaKnown RBP11.94□□□□□ -0.5
HPS4-216ENST00000493455 C10orf113Q5VZT2 155 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 LEMD1Q68G75 181 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 C9orf62Q8N4C0 152 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 MARC2Q969Z3 335 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 GRAMD2BQ96HH9 432 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 ARV1Q9H2C2 271 aa11.94□□□□□ -0.5
HPS4-216ENST00000493455 A0A1W2PS18 150 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 G3V4G9 280 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 CRYBB3P26998 211 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 BMI1P35226 326 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 PATE2Q6UY27 113 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 RNF2Q99496 336 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 SCRT1Q9BWW7 348 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 TMEM231Q9H6L2 316 aa11.93□□□□□ -0.5
HPS4-216ENST00000493455 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 CD300EQ496F6 205 aaPredicted RBP11.92□□□□□ -0.5
HPS4-216ENST00000493455 LAMTOR1Q6IAA8 161 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 RBPMS2Q6ZRY4 209 aaKnown RBP11.92□□□□□ -0.5
HPS4-216ENST00000493455 LINC00305Q7Z4B0 112 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 OR2G3Q8NGZ4 309 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 PFDN5Q99471 154 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 SLC25A39Q9BZJ4 359 aaPredicted RBP11.92□□□□□ -0.5
HPS4-216ENST00000493455 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 DNAJC4Q9NNZ3 241 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 PFDN2Q9UHV9 154 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 TIMM9Q9Y5J7 89 aa11.92□□□□□ -0.5
HPS4-216ENST00000493455 H3BRN7 92 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 C4BPBP20851 252 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 TFPI2P48307 235 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 PLP1P60201 277 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 RAB2AP61019 212 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 GUCA2BQ16661 112 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 DEFB114Q30KQ6 69 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 PXDC1Q5TGL8 231 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 OR8I2Q8N0Y5 310 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 GBGT1Q8N5D6 347 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 GNPNAT1Q96EK6 184 aaPredicted RBP11.91□□□□□ -0.5
HPS4-216ENST00000493455 VSIRQ9H7M9 311 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 BOLA1Q9Y3E2 137 aa11.91□□□□□ -0.5
HPS4-216ENST00000493455 IZUMO1RA6ND01 250 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 ZNF98A6NK75 572 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 EIF3GO75821 320 aaKnown RBP eCLIP11.9□□□□□ -0.5
HPS4-216ENST00000493455 IGLV1-51P01701 117 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 TPT1P13693 172 aaKnown RBP11.9□□□□□ -0.5
HPS4-216ENST00000493455 S100A7P31151 101 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 INSL3P51460 131 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
HPS4-216ENST00000493455 FAM78BQ5VT40 261 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 SPATA31B1PQ5VZV4 182 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 FAM122CQ6P4D5 195 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 WFDC3Q8IUB2 231 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 TMEM61Q8N0U2 210 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 PSMG3Q9BT73 122 aaPredicted RBP11.9□□□□□ -0.5
HPS4-216ENST00000493455 SHANK2-AS3Q9BTD1 123 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.5
HPS4-216ENST00000493455 U3KQE9 123 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 DNHD1Q96M86 4753 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 TRRAPQ9Y4A5 3859 aa11.9□□□□□ -0.5
HPS4-216ENST00000493455 NOTCH3Q9UM47 2321 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 ELOA3CA0A087WX78 387 aaPredicted RBP11.89□□□□□ -0.51
HPS4-216ENST00000493455 TRAV5A0A0B4J249 113 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 BUB3O43684 328 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 EIF5AP63241 154 aaKnown RBP11.89□□□□□ -0.51
HPS4-216ENST00000493455 C16orf54Q6UWD8 224 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 SIGLEC15Q6ZMC9 328 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 S100A7AQ86SG5 101 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 STXBP6Q8NFX7 210 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
HPS4-216ENST00000493455 SNRPCP09234 159 aaKnown RBP11.88□□□□□ -0.51
HPS4-216ENST00000493455 AKR1C8PQ5T2L2 129 aa11.88□□□□□ -0.51
HPS4-216ENST00000493455 LCN12Q6JVE5 192 aa11.88□□□□□ -0.51
HPS4-216ENST00000493455 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
HPS4-216ENST00000493455 BAP18Q8IXM2 172 aa11.88□□□□□ -0.51
HPS4-216ENST00000493455 OR10G4Q8NGN3 311 aa11.88□□□□□ -0.51
HPS4-216ENST00000493455 OR10G9Q8NGN4 311 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms