RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 S100A7AQ86SG5 101 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 RABAC1Q9UI14 185 aa16.93■□□□□ 0.3
PSPC1-204ENST00000492741 RGS13O14921 159 aa16.92■□□□□ 0.3
PSPC1-204ENST00000492741 HOXD3P31249 432 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-204ENST00000492741 BLOC1S1P78537 153 aa16.92■□□□□ 0.3
PSPC1-204ENST00000492741 GPHB5Q86YW7 130 aa16.92■□□□□ 0.3
PSPC1-204ENST00000492741 RNF2Q99496 336 aa16.92■□□□□ 0.3
PSPC1-204ENST00000492741 ZFAND3Q9H8U3 227 aa16.92■□□□□ 0.3
PSPC1-204ENST00000492741 SEPSECSQ9HD40 501 aaKnown RBP16.92■□□□□ 0.3
PSPC1-204ENST00000492741 SETD2Q9BYW2 2564 aaPredicted RBP16.92■□□□□ 0.3
PSPC1-204ENST00000492741 ZNF207O43670 478 aaKnown RBP16.91■□□□□ 0.3
PSPC1-204ENST00000492741 UNQ9165/PRO28630Q6UXU0 137 aa16.91■□□□□ 0.3
PSPC1-204ENST00000492741 TMEM158Q8WZ71 300 aa16.91■□□□□ 0.3
PSPC1-204ENST00000492741 MRPL27Q9P0M9 148 aaKnown RBP16.91■□□□□ 0.3
PSPC1-204ENST00000492741 HMGB3O15347 200 aaKnown RBP16.9■□□□□ 0.3
PSPC1-204ENST00000492741 EIF3GO75821 320 aaKnown RBP eCLIP16.9■□□□□ 0.3
PSPC1-204ENST00000492741 H2AFB1P0C5Y9 115 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 NDUFA11Q86Y39 141 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 SFT2D1Q8WV19 159 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 RAB24Q969Q5 203 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 SAT2Q96F10 170 aaPredicted RBP16.9■□□□□ 0.3
PSPC1-204ENST00000492741 ZNF414Q96IQ9 312 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 METTL26Q96S19 204 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 FUT9Q9Y231 359 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 NPPCP23582 126 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 S100A7P31151 101 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 SPATA31B1PQ5VZV4 182 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 LCN15Q6UWW0 184 aa16.9■□□□□ 0.3
PSPC1-204ENST00000492741 MRPL32Q9BYC8 188 aaKnown RBP16.9■□□□□ 0.3
PSPC1-204ENST00000492741 SLC25A39Q9BZJ4 359 aaPredicted RBP16.9■□□□□ 0.3
PSPC1-204ENST00000492741 CTXND1A0A1B0GTU2 59 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 SEC14L6B5MCN3 397 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 CCL24O00175 119 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 SLURP1P55000 103 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 SYNJ2BPP57105 145 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 ZNF726P1Q15940 193 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 MIR17HGQ75NE6 70 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 RAX2Q96IS3 184 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 PFDN2Q9UHV9 154 aa16.89■□□□□ 0.29
PSPC1-204ENST00000492741 A0A1B0GV50 99 aa16.88■□□□□ 0.29
PSPC1-204ENST00000492741 TMEM190Q8WZ59 177 aa16.88■□□□□ 0.29
PSPC1-204ENST00000492741 TAS2R45P59539 299 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 SSX7Q7RTT5 188 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 NARS2Q96I59 477 aaKnown RBP16.87■□□□□ 0.29
PSPC1-204ENST00000492741 TECRQ9NZ01 308 aaKnown RBP16.87■□□□□ 0.29
PSPC1-204ENST00000492741 MAP1LC3B2A6NCE7 125 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 TEX46H3BTG2 121 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 NMBP08949 121 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 C8orf88P0DMB2 117 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 MORN5Q5VZ52 161 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 LEMD1Q68G75 181 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 C1QL4Q86Z23 238 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 MAP1LC3BQ9GZQ8 125 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 HRH4Q9H3N8 390 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 UFC1Q9Y3C8 167 aa16.87■□□□□ 0.29
PSPC1-204ENST00000492741 TRAV5A0A0B4J249 113 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 ADARB2-AS1A8MUL3 147 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 FGF8P55075 233 aaPredicted RBP16.86■□□□□ 0.29
PSPC1-204ENST00000492741 KLF5Q13887 457 aaPredicted RBP16.86■□□□□ 0.29
PSPC1-204ENST00000492741 IQCF2Q8IXL9 164 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 CITED1Q99966 193 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 SHANK2-AS3Q9BTD1 123 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 SCRT1Q9BWW7 348 aa16.86■□□□□ 0.29
PSPC1-204ENST00000492741 DAZ1Q9NQZ3 744 aaKnown RBP16.86■□□□□ 0.29
PSPC1-204ENST00000492741 IGHV3-49A0A0A0MS15 119 aa16.85■□□□□ 0.29
PSPC1-204ENST00000492741 H3BRN7 92 aa16.85■□□□□ 0.29
PSPC1-204ENST00000492741 TM4SF20Q53R12 229 aa16.85■□□□□ 0.29
PSPC1-204ENST00000492741 KHDC3LQ587J8 217 aa16.85■□□□□ 0.29
PSPC1-204ENST00000492741 IGHV3OR16-13A0A075B7E8 117 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 IGHV3-74A0A0B4J1X5 117 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 ZNF98A6NK75 572 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 OR7C2O60412 319 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 CRYBB3P26998 211 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 CLLU1Q5K131 121 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 C12orf54Q6X4T0 127 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 REC114Q7Z4M0 266 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 LURAP1LQ8IV03 231 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 MBD3L1Q8WWY6 194 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 RNF24Q9Y225 148 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 IGHV3-66A0A0C4DH42 116 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 K7EMT4 169 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 LGALS9O00182 355 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 HBE1P02100 147 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 C3orf56Q8N813 242 aa16.84■□□□□ 0.29
PSPC1-204ENST00000492741 DLX4Q92988 240 aaPredicted RBP16.84■□□□□ 0.29
PSPC1-204ENST00000492741 CXorf1O96002 111 aa16.83■□□□□ 0.28
PSPC1-204ENST00000492741 STAG3L2P0CL84 134 aa16.83■□□□□ 0.28
PSPC1-204ENST00000492741 STAG3L3P0CL85 134 aa16.83■□□□□ 0.28
PSPC1-204ENST00000492741 ARL14EPLP0DKL9 152 aa16.83■□□□□ 0.28
PSPC1-204ENST00000492741 SLC25A2Q9BXI2 301 aa16.83■□□□□ 0.28
PSPC1-204ENST00000492741 APOHP02749 345 aaPredicted RBP16.82■□□□□ 0.28
PSPC1-204ENST00000492741 MYCNOSP40205 109 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 FHL3Q13643 280 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 OR8I2Q8N0Y5 310 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 PEMTQ9UBM1 199 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 A0A1W2PS18 150 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 PF4P02776 101 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 PQLC2Q6ZP29 291 aa16.82■□□□□ 0.28
PSPC1-204ENST00000492741 IGHV7-4-1A0A0J9YVY3 117 aa16.81■□□□□ 0.28
PSPC1-204ENST00000492741 BUB3O43684 328 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms