RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 RAB40CQ96S21 281 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 TENM2Q9NT68 2774 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 NUDT15Q9NV35 164 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 GSKIPQ9P0R6 139 aa11.05□□□□□ -0.64
USP39-217ENST00000491659 STARD9Q9P2P6 4700 aa11.04□□□□□ -0.64
USP39-217ENST00000491659 AGRNO00468 2067 aa11.04□□□□□ -0.64
USP39-217ENST00000491659 NUPR2A6NF83 97 aa11.04□□□□□ -0.64
USP39-217ENST00000491659 SLC45A2Q9UMX9 530 aa11.04□□□□□ -0.64
USP39-217ENST00000491659 FAM240BA0A1B0GVZ2 78 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 CCSO14618 274 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 TSC22D2O75157 780 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 ID1P41134 155 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 EWSR1Q01844 656 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP39-217ENST00000491659 TMEM144Q7Z5S9 345 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 ZNF431Q8TF32 576 aaPredicted RBP11.03□□□□□ -0.64
USP39-217ENST00000491659 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
USP39-217ENST00000491659 MGAT4CQ9UBM8 478 aa11.03□□□□□ -0.64
USP39-217ENST00000491659 RCL1Q9Y2P8 373 aaKnown RBP11.03□□□□□ -0.64
USP39-217ENST00000491659 PMS2P5A8MQ11 134 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 FAM25EA8MYX2 175 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 H2AFB2P0C5Z0 115 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 METTL15P1P0C7V9 234 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 ORM2P19652 201 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 C4BPBP20851 252 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 PSMB3P49720 205 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 PAX9P55771 341 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 TAS2R30P59541 319 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 RRAS2P62070 204 aaPredicted RBP11.02□□□□□ -0.65
USP39-217ENST00000491659 DLK1P80370 383 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 TMEM14EPQ6UXP3 125 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 OR10P1Q8NGE3 313 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 OR1B1Q8NGR6 318 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 ENKURQ8TC29 256 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 SEC22CQ9BRL7 303 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 TMEM147Q9BVK8 224 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 SLC25A22Q9H936 323 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 RYR3Q15413 4870 aa11.02□□□□□ -0.65
USP39-217ENST00000491659 L7N2F9 121 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 CCNKO75909 580 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 IL5P05113 134 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 GATA2P23769 480 aaPredicted RBP11.01□□□□□ -0.65
USP39-217ENST00000491659 GALR1P47211 349 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 MEOX2P50222 304 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 NUTF2P61970 127 aaKnown RBP11.01□□□□□ -0.65
USP39-217ENST00000491659 VAMP2P63027 116 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 CYP2G1PQ6ZSU1 146 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 C12orf45Q8N5I9 185 aaPredicted RBP11.01□□□□□ -0.65
USP39-217ENST00000491659 SLC25A32Q9H2D1 315 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 TBC1D24Q9ULP9 559 aa11.01□□□□□ -0.65
USP39-217ENST00000491659 C5orf51A6NDU8 294 aa11□□□□□ -0.65
USP39-217ENST00000491659 ZNF98A6NK75 572 aa11□□□□□ -0.65
USP39-217ENST00000491659 FNDC10F2Z333 226 aa11□□□□□ -0.65
USP39-217ENST00000491659 MBPP02686 304 aaPredicted RBP11□□□□□ -0.65
USP39-217ENST00000491659 HLA-DRB4P13762 266 aa11□□□□□ -0.65
USP39-217ENST00000491659 RAP2BP61225 183 aa11□□□□□ -0.65
USP39-217ENST00000491659 TMEM182Q6ZP80 229 aaPredicted RBP11□□□□□ -0.65
USP39-217ENST00000491659 LINC00052Q96N35 136 aa11□□□□□ -0.65
USP39-217ENST00000491659 GPR82Q96P67 336 aa11□□□□□ -0.65
USP39-217ENST00000491659 C1QTNF4Q9BXJ3 329 aa11□□□□□ -0.65
USP39-217ENST00000491659 MFFQ9GZY8 342 aa11□□□□□ -0.65
USP39-217ENST00000491659 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
USP39-217ENST00000491659 LSM5Q9Y4Y9 91 aaKnown RBP11□□□□□ -0.65
USP39-217ENST00000491659 HLA-DRB4X5D2U9 266 aa11□□□□□ -0.65
USP39-217ENST00000491659 C7orf66A4D0T2 115 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 H3BMM0 161 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 ISLRO14498 428 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 SOCS3O14543 225 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 GIG44P09565 113 aaPredicted RBP10.99□□□□□ -0.65
USP39-217ENST00000491659 LINC00869P0C866 280 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 SELENOTP62341 195 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
USP39-217ENST00000491659 NRARPQ7Z6K4 114 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 LYSTQ99698 3801 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 NPVFQ9HCQ7 196 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 CLEC5AQ9NY25 188 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 DOK5Q9P104 306 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 HIGD1AQ9Y241 93 aa10.99□□□□□ -0.65
USP39-217ENST00000491659 K7EPK0 472 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 MIFP14174 115 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 PVALBP20472 110 aaPredicted RBP10.98□□□□□ -0.65
USP39-217ENST00000491659 TEPPQ6URK8 271 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 GSG1LQ6UXU4 331 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 S100A7AQ86SG5 101 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 C16orf92Q96LL3 132 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 C2orf50Q96LR7 162 aa10.98□□□□□ -0.65
USP39-217ENST00000491659 SAV1Q9H4B6 383 aaPredicted RBP10.98□□□□□ -0.65
USP39-217ENST00000491659 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 ZNF705EA8MWA4 302 aaPredicted RBP10.97□□□□□ -0.65
USP39-217ENST00000491659 H3BRN7 92 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 DEFB4AO15263 64 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 HYPMO75409 117 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 OR5G3P0C626 314 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 CAV2P51636 162 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 SLC38A11Q08AI6 406 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 SPATA31B1PQ5VZV4 182 aa10.97□□□□□ -0.65
USP39-217ENST00000491659 ZNF546Q86UE3 836 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms