RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 FAM210AQ96ND0 272 aa10.46□□□□□ -0.73
NUP188-208ENST00000491502 PLXNB1O43157 2135 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 RBFOX3A6NFN3 312 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 OR2T8A6NH00 312 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 OR2C1O95371 312 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 STAG3L2P0CL84 134 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 STAG3L3P0CL85 134 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 GATA2P23769 480 aaPredicted RBP10.45□□□□□ -0.74
NUP188-208ENST00000491502 LYZP61626 148 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 ZNF726P1Q15940 193 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 GUK1Q16774 197 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 TMEM95Q3KNT9 176 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 GCSAMLQ5JQS6 135 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 IQCF2Q8IXL9 164 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 SUN5Q8TC36 379 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 TXNDC17Q9BRA2 123 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 TREM1Q9NP99 234 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 TMEM167BQ9NRX6 74 aa10.45□□□□□ -0.74
NUP188-208ENST00000491502 A0A1B0GV50 99 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 BMPR1BO00238 502 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 TGOLN2O43493 480 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 CTSGP08311 255 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 GPR183P32249 361 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 CLEC19AQ6UXS0 136 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 LINC00305Q7Z4B0 112 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 OR4F17Q8NGA8 305 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 OR4X2Q8NGF9 303 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 RNF125Q96EQ8 232 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 OR4F4Q96R69 305 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 CITED2Q99967 270 aaPredicted RBP10.44□□□□□ -0.74
NUP188-208ENST00000491502 GNB4Q9HAV0 340 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 GNG13Q9P2W3 67 aa10.44□□□□□ -0.74
NUP188-208ENST00000491502 VWFP04275 2813 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.43□□□□□ -0.74
NUP188-208ENST00000491502 I3L521 148 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 NDUFS6O75380 124 aaKnown RBP10.43□□□□□ -0.74
NUP188-208ENST00000491502 IL4P05112 153 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 PSMB8P28062 276 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 FGF8P55075 233 aaPredicted RBP10.43□□□□□ -0.74
NUP188-208ENST00000491502 NSUN5P1Q3KNT7 163 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 TMEM37Q8WXS4 190 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 TMEM190Q8WZ59 177 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 NARS2Q96I59 477 aaKnown RBP10.43□□□□□ -0.74
NUP188-208ENST00000491502 SEPSECSQ9HD40 501 aaKnown RBP10.43□□□□□ -0.74
NUP188-208ENST00000491502 DOK5Q9P104 306 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 VAX2Q9UIW0 290 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 S4R3C0 116 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
NUP188-208ENST00000491502 WI2-2373I1.2A0A1W2PRP0 233 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 F8W735 103 aaPredicted RBP10.42□□□□□ -0.74
NUP188-208ENST00000491502 OR7C2O60412 319 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 IGHV3-23P01764 117 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 HSPB1P04792 205 aaKnown RBP10.42□□□□□ -0.74
NUP188-208ENST00000491502 BCL2P10415 239 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 ARL3P36405 182 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 TOR2AQ5JU69 321 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 ZNF506Q5JVG8 444 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 ZNF343Q6P1L6 599 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 MIR17HGQ75NE6 70 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 ZNF491Q8N8L2 437 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 NKX6-2Q9C056 277 aaPredicted RBP10.42□□□□□ -0.74
NUP188-208ENST00000491502 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
NUP188-208ENST00000491502 RABAC1Q9UI14 185 aa10.42□□□□□ -0.74
NUP188-208ENST00000491502 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
NUP188-208ENST00000491502 CD5P06127 495 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 ARL14EPLP0DKL9 152 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 GCHFRP30047 84 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 CCL20P78556 96 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 SSX7Q7RTT5 188 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 ZNF329Q86UD4 541 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 CCDC140Q96MF4 163 aa10.41□□□□□ -0.74
NUP188-208ENST00000491502 PUS1Q9Y606 427 aaKnown RBP eCLIP10.41□□□□□ -0.74
NUP188-208ENST00000491502 LOC102723971A0A1B0GUV8 181 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 ADARB2-AS1A8MUL3 147 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 NDUFA4O00483 81 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 HMGB3O15347 200 aaKnown RBP10.4□□□□□ -0.74
NUP188-208ENST00000491502 GGCTO75223 188 aaKnown RBP10.4□□□□□ -0.74
NUP188-208ENST00000491502 HAGHQ16775 308 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 PATE2Q6UY27 113 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 BPIFA4PQ86YQ2 179 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 UBE2E2Q96LR5 201 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 SHANK2-AS3Q9BTD1 123 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 CHRDL1Q9BU40 450 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 PAXXQ9BUH6 204 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 SLC25A39Q9BZJ4 359 aaPredicted RBP10.4□□□□□ -0.74
NUP188-208ENST00000491502 SLC35B3Q9H1N7 401 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 KLK15Q9H2R5 256 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 OR51M1Q9H341 326 aa10.4□□□□□ -0.74
NUP188-208ENST00000491502 PEF1Q9UBV8 284 aaKnown RBP10.4□□□□□ -0.74
NUP188-208ENST00000491502 TMEM218A2RU14 115 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 PDE6DO43924 150 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 ZP3P21754 424 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 ADMP35318 185 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 UBE2L3P68036 154 aaKnown RBP10.39□□□□□ -0.75
NUP188-208ENST00000491502 DEFA5Q01523 94 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 MEF2BQ02080 365 aaPredicted RBP10.39□□□□□ -0.75
NUP188-208ENST00000491502 FAM106AQ4KMX7 169 aa10.39□□□□□ -0.75
NUP188-208ENST00000491502 TCTEX1D4Q5JR98 221 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms