RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	PAX9	P55771	341 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	LYZ	P61626	148 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	GDF5OS	Q5U4N7	250 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	EBLN2	Q6P2I7	272 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	OR8I2	Q8N0Y5	310 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	CIB3	Q96Q77	187 aa	Predicted RBP	12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	SLC45A2	Q9UMX9	530 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	VPS13D	Q5THJ4	4388 aa		12.85	□□□□□ -0.35
GGA1-223	ENST00000491295	SOCS3	O14543	225 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	NOL3	O60936	208 aa	Known RBP	12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	PSG9	Q00887	426 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	ZNF79	Q15937	498 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	THAP8	Q8NA92	274 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	PPP1R14B	Q96C90	147 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	SLC25A21	Q9BQT8	299 aa	Predicted RBP	12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	GOLT1B	Q9Y3E0	138 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	TMED3	Q9Y3Q3	217 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	DNAH10	Q8IVF4	4471 aa		12.84	□□□□□ -0.35
GGA1-223	ENST00000491295	HECTD4	Q9Y4D8	3996 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	IGKV3-20	P01619	116 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	ZNF767P	Q75MW2	155 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	ZNF709	Q8N972	641 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	OR4B1	Q8NGF8	309 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	RPRM	Q9NS64	109 aa		12.83	□□□□□ -0.36
GGA1-223	ENST00000491295	GALR1	P47211	349 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	OXA1L	Q15070	435 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	TMED4	Q7Z7H5	227 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	TOMM5	Q8N4H5	51 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	OR4D5	Q8NGN0	318 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	MCFD2	Q8NI22	146 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	NIPSNAP3B	Q9BS92	247 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	KRTAP17-1	Q9BYP8	105 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	DKK2	Q9UBU2	259 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	DNAH6	Q9C0G6	4158 aa		12.82	□□□□□ -0.36
GGA1-223	ENST00000491295	OR2F1	Q13607	317 aa		12.81	□□□□□ -0.36
GGA1-223	ENST00000491295	GPR82	Q96P67	336 aa		12.81	□□□□□ -0.36
GGA1-223	ENST00000491295	IGHV3OR16-12	A0A075B7B8	117 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	IGKV1OR2-108	A0A075B7D4	117 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295		A0A0J9YX75	114 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295		H3BMQ9	156 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	SYNGR2	O43760	224 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	IFNA21	P01568	189 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	HBE1	P02100	147 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	IAPP	P10997	89 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	VAMP1	P23763	118 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	EMP1	P54849	157 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	FXYD7	P58549	80 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	LGALS9B	Q3B8N2	356 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	FAM78B	Q5VT40	261 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	TRIM63	Q969Q1	353 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	C16orf92	Q96LL3	132 aa		12.8	□□□□□ -0.36
GGA1-223	ENST00000491295	ZNF98	A6NK75	572 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295		A8MTW9	85 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	DEFB1	P60022	68 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	PYDC2	Q56P42	97 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	FAM222A	Q5U5X8	452 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	BPIFC	Q8NFQ6	507 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	OR1B1	Q8NGR6	318 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	C7orf50	Q9BRJ6	194 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	SLC35B3	Q9H1N7	401 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	DOK5	Q9P104	306 aa		12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	PAIP2B	Q9ULR5	123 aa	Known RBP	12.79	□□□□□ -0.36
GGA1-223	ENST00000491295	PRSS46	E5RG02	174 aa		12.78	□□□□□ -0.36
GGA1-223	ENST00000491295	SFT2D2	O95562	160 aa		12.78	□□□□□ -0.36
GGA1-223	ENST00000491295	RRN3P1	Q2M238	152 aa		12.78	□□□□□ -0.36
GGA1-223	ENST00000491295	C1orf158	Q8N1D5	194 aa		12.78	□□□□□ -0.36
GGA1-223	ENST00000491295	WRB	O00258	174 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	UBE2M	P61081	183 aa	Known RBP	12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	B2M	P61769	119 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	RNF212	Q495C1	297 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	IGF2BP2-AS1	Q96M15	143 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	RSG1	Q9BU20	258 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	TMEM147	Q9BVK8	224 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	SCRT1	Q9BWW7	348 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	MAGT1	Q9H0U3	335 aa		12.77	□□□□□ -0.37
GGA1-223	ENST00000491295	LOC102723971	A0A1B0GUV8	181 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295		A0A1B0GVY2	172 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295		F6UB75	175 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	DUSP14	O95147	198 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	S100A5	P33763	92 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	SPANXN5	Q5MJ07	72 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	SLC25A32	Q9H2D1	315 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	SLC25A22	Q9H936	323 aa		12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	STRAP	Q9Y3F4	350 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.76	□□□□□ -0.37
GGA1-223	ENST00000491295	PRSS29P	A6NIE9	313 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	ORM2	P19652	201 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	PPP1R1A	Q13522	171 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	TMEM144	Q7Z5S9	345 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	S100A7A	Q86SG5	101 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	UBE2DNL	Q8IWF7	75 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	C20orf173	Q96LM9	149 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	TMEM208	Q9BTX3	173 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295		V9GYH0	126 aa		12.75	□□□□□ -0.37
GGA1-223	ENST00000491295	HOXB5	P09067	269 aa		12.74	□□□□□ -0.37
GGA1-223	ENST00000491295	ID3	Q02535	119 aa		12.74	□□□□□ -0.37
GGA1-223	ENST00000491295	AKR1C1	Q04828	323 aa		12.74	□□□□□ -0.37
GGA1-223	ENST00000491295	AMTN	Q6UX39	209 aa		12.74	□□□□□ -0.37
GGA1-223	ENST00000491295	RNF24	Q9Y225	148 aa		12.74	□□□□□ -0.37
GGA1-223	ENST00000491295		M0R2N4	97 aa		12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms