RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663		K7EQG2	157 aa		13.76	□□□□□ -0.21
C4A-256	ENST00000490663	CXCL3	P19876	107 aa		13.76	□□□□□ -0.21
C4A-256	ENST00000490663	DEFB131A	P59861	70 aa		13.76	□□□□□ -0.21
C4A-256	ENST00000490663	MGST2	Q99735	147 aa		13.76	□□□□□ -0.21
C4A-256	ENST00000490663	NPVF	Q9HCQ7	196 aa		13.76	□□□□□ -0.21
C4A-256	ENST00000490663	UBE2L5P	A0A1B0GUS4	154 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	LINC00869	P0C866	280 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	TEPP	Q6URK8	271 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	DCANP1	Q8TF63	244 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	PPP1R1C	Q8WVI7	109 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	SCRT1	Q9BWW7	348 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	GGTLC1	Q9BX51	225 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	ZMAT4	Q9H898	229 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	SLC25A22	Q9H936	323 aa		13.75	□□□□□ -0.21
C4A-256	ENST00000490663	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.74	□□□□□ -0.21
C4A-256	ENST00000490663	HELT	A6NFD8	242 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	AGPAT2	O15120	278 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	SULT1A1	P50225	295 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	NHLH2	Q02577	135 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	FCN2	Q15485	313 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	UHRF2	Q96PU4	802 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	SLC25A32	Q9H2D1	315 aa		13.74	□□□□□ -0.21
C4A-256	ENST00000490663	FNDC10	F2Z333	226 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	CD5	P06127	495 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	OR5G3	P0C626	314 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
C4A-256	ENST00000490663	STX12	Q86Y82	276 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	OR11H7	Q8NGC8	314 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	TMEM147	Q9BVK8	224 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	ARL6	Q9H0F7	186 aa		13.73	□□□□□ -0.21
C4A-256	ENST00000490663	KNCN	A6PVL3	124 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	MPC2	O95563	127 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	DEFB1	P60022	68 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	RGS21	Q2M5E4	152 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	SPATA25	Q9BR10	227 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	RNF126	Q9BV68	326 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	UQCC1	Q9NVA1	299 aa		13.72	□□□□□ -0.21
C4A-256	ENST00000490663	TRAV2	A0A0B4J234	112 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	ZNF98	A6NK75	572 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663		E5RGE8	158 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663		H3BRN7	92 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	RLN2	P04090	185 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	CYCS	P99999	105 aa	Known RBP	13.71	□□□□□ -0.21
C4A-256	ENST00000490663	BAX	Q07812	192 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	PSMG4	Q5JS54	123 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	MIC13	Q5XKP0	118 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	PATE2	Q6UY27	113 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	OR8I2	Q8N0Y5	310 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	GGACT	Q9BVM4	153 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	MED28	Q9H204	178 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	NRN1	Q9NPD7	142 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	MBD2	Q9UBB5	411 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	SLC45A2	Q9UMX9	530 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	HIGD1A	Q9Y241	93 aa		13.71	□□□□□ -0.21
C4A-256	ENST00000490663	CFD	P00746	253 aa	Predicted RBP	13.7	□□□□□ -0.22
C4A-256	ENST00000490663	FGF7	P21781	194 aa		13.7	□□□□□ -0.22
C4A-256	ENST00000490663	NUP62	P37198	522 aa	Predicted RBP	13.7	□□□□□ -0.22
C4A-256	ENST00000490663	CLINT1	Q14677	625 aa		13.7	□□□□□ -0.22
C4A-256	ENST00000490663	ZNF546	Q86UE3	836 aa		13.7	□□□□□ -0.22
C4A-256	ENST00000490663	OR5C1	Q8NGR4	320 aa		13.7	□□□□□ -0.22
C4A-256	ENST00000490663	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.7	□□□□□ -0.22
C4A-256	ENST00000490663	WDR83OS	Q9Y284	106 aa		13.7	□□□□□ -0.22
C4A-256	ENST00000490663	HYPM	O75409	117 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	CAMLG	P49069	296 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	SELENOT	P62341	195 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	HBG1	P69891	147 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	HBG2	P69892	147 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	VWC2	Q2TAL6	325 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	DEFB135	Q30KP9	77 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	THAP6	Q8TBB0	222 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	PFDN2	Q9UHV9	154 aa		13.69	□□□□□ -0.22
C4A-256	ENST00000490663	S100A11	P31949	105 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	AP2S1	P53680	142 aa	Predicted RBP	13.68	□□□□□ -0.22
C4A-256	ENST00000490663	RAP2B	P61225	183 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	MORN5	Q5VZ52	161 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	C17orf77	Q96MU5	243 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	SHANK2-AS3	Q9BTD1	123 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	SMIM3	Q9BZL3	60 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	SLC25A31	Q9H0C2	315 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	FBXL17	Q9UF56	701 aa		13.68	□□□□□ -0.22
C4A-256	ENST00000490663	SNRPC	P09234	159 aa	Known RBP	13.67	□□□□□ -0.22
C4A-256	ENST00000490663	PRB4	P10163	310 aa	Predicted RBP	13.67	□□□□□ -0.22
C4A-256	ENST00000490663	CMC4	P56277	68 aa	Predicted RBP	13.67	□□□□□ -0.22
C4A-256	ENST00000490663	PLP1	P60201	277 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	ACTL10	Q5JWF8	245 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	C1orf194	Q5T5A4	169 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	WWC2-AS2	Q96NR7	200 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	RSG1	Q9BU20	258 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	ARV1	Q9H2C2	271 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	DNAH7	Q8WXX0	4024 aa		13.67	□□□□□ -0.22
C4A-256	ENST00000490663	SOCS3	O14543	225 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	COX7A2P2	O60397	106 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	APOC4	P55056	127 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	OPCML	Q14982	345 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	OXA1L	Q15070	435 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	IGFL4	Q6B9Z1	124 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	LINC00052	Q96N35	136 aa		13.66	□□□□□ -0.22
C4A-256	ENST00000490663	GALR1	P47211	349 aa		13.65	□□□□□ -0.22
C4A-256	ENST00000490663	FGL1	Q08830	312 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms