RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 IFNA7P01567 189 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 OR5G3P0C626 314 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 NPPCP23582 126 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 SYNJ2BPP57105 145 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 RHOBP62745 196 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 KRTAP21-3Q3LHN1 58 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 TMED6Q8WW62 240 aa10.14□□□□□ -0.79
SNX12-205ENST00000490561 MRPL27Q9P0M9 148 aaKnown RBP10.14□□□□□ -0.79
SNX12-205ENST00000490561 CRYBB3P26998 211 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 SLURP1P55000 103 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 USF2Q15853 346 aaPredicted RBP10.13□□□□□ -0.79
SNX12-205ENST00000490561 OR10G4Q8NGN3 311 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 OR10G9Q8NGN4 311 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 OR10G7Q8NGN6 311 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 LRRC20Q8TCA0 184 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 GRAMD2BQ96HH9 432 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 RCC1LQ96I51 464 aaKnown RBP10.13□□□□□ -0.79
SNX12-205ENST00000490561 ZNF414Q96IQ9 312 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 ELOVL1Q9BW60 279 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 ACTR3CQ9C0K3 210 aaPredicted RBP10.13□□□□□ -0.79
SNX12-205ENST00000490561 DOK5Q9P104 306 aa10.13□□□□□ -0.79
SNX12-205ENST00000490561 A0A1W2PPV4 95 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 OVOL1O14753 267 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 SULT1A2P50226 295 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 TAS2R45P59539 299 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 C1orf194Q5T5A4 169 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 HIST2H2BDQ6DRA6 164 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 TEX261Q6UWH6 196 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 UNQ9165/PRO28630Q6UXU0 137 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 LINC00305Q7Z4B0 112 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 OR9G4Q8NGQ1 327 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 GPR82Q96P67 336 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 SHANK2-AS3Q9BTD1 123 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 FUT9Q9Y231 359 aa10.12□□□□□ -0.79
SNX12-205ENST00000490561 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 SEC14L6B5MCN3 397 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 H3BRN7 92 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 CD5P06127 495 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 CDC34P49427 236 aaPredicted RBP10.11□□□□□ -0.79
SNX12-205ENST00000490561 RAB2AP61019 212 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 FAM78BQ5VT40 261 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 PATE2Q6UY27 113 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 STXBP6Q8NFX7 210 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 RNF141Q8WVD5 230 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 TMEM37Q8WXS4 190 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 DLX4Q92988 240 aaPredicted RBP10.11□□□□□ -0.79
SNX12-205ENST00000490561 DUX3Q96PT4 197 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 SLC25A39Q9BZJ4 359 aaPredicted RBP10.11□□□□□ -0.79
SNX12-205ENST00000490561 RPRMQ9NS64 109 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 UBQLN2Q9UHD9 624 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 U3KQE9 123 aa10.11□□□□□ -0.79
SNX12-205ENST00000490561 ATRQ13535 2644 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 CTXND1A0A1B0GTU2 59 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 TMEM213A2RRL7 107 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 C2orf70A6NJV1 201 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 TEX46H3BTG2 121 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 C8orf88P0DMB2 117 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 GCSAMLQ5JQS6 135 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 FAM122CQ6P4D5 195 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 ZNF767PQ75MW2 155 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 LINC00482Q8N8I6 264 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 ZNF680Q8NEM1 530 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 SIGLEC8Q9NYZ4 499 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 TECRQ9NZ01 308 aaKnown RBP10.1□□□□□ -0.79
SNX12-205ENST00000490561 SMPXQ9UHP9 88 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
SNX12-205ENST00000490561 IGHV3OR16-8A0A075B7F1 116 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 ZNF98A6NK75 572 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 RPL7P18124 248 aaKnown RBP10.09□□□□□ -0.79
SNX12-205ENST00000490561 BLOC1S1P78537 153 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 TM4SF20Q53R12 229 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 RPP25LQ8N5L8 163 aaKnown RBP10.09□□□□□ -0.79
SNX12-205ENST00000490561 FAM213BQ8TBF2 198 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 MCRIP2Q9BUT9 160 aaKnown RBP10.09□□□□□ -0.79
SNX12-205ENST00000490561 VSIRQ9H7M9 311 aa10.09□□□□□ -0.79
SNX12-205ENST00000490561 HELTA6NFD8 242 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 ZNF207O43670 478 aaKnown RBP10.08□□□□□ -0.8
SNX12-205ENST00000490561 BUB3O43684 328 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 FOLR2P14207 255 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 CBLN1P23435 193 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 MEOX2P50222 304 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 PQLC2Q6ZP29 291 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 BPIFA4PQ86YQ2 179 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 RAB24Q969Q5 203 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 SAT2Q96F10 170 aaPredicted RBP10.08□□□□□ -0.8
SNX12-205ENST00000490561 UHRF2Q96PU4 802 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 MDFIQ99750 246 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 RHPN1-AS1Q9BWJ2 59 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 SLC25A22Q9H936 323 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 SEPSECSQ9HD40 501 aaKnown RBP10.08□□□□□ -0.8
SNX12-205ENST00000490561 TMEM14CQ9P0S9 112 aa10.08□□□□□ -0.8
SNX12-205ENST00000490561 ZNF705EA8MWA4 302 aaPredicted RBP10.07□□□□□ -0.8
SNX12-205ENST00000490561 CHEK1O14757 476 aa10.07□□□□□ -0.8
SNX12-205ENST00000490561 HBE1P02100 147 aa10.07□□□□□ -0.8
SNX12-205ENST00000490561 CSN3P07498 182 aa10.07□□□□□ -0.8
SNX12-205ENST00000490561 H2AFB1P0C5Y9 115 aa10.07□□□□□ -0.8
SNX12-205ENST00000490561 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
SNX12-205ENST00000490561 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms