RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 TMEM231Q9H6L2 316 aa10.73□□□□□ -0.69
SRGAP3-208ENST00000490348 G3V3Q6 166 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 FRMD6-AS1P0C7T7 363 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 LINC00869P0C866 280 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 ORM2P19652 201 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 TFPI2P48307 235 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 BAXQ07812 192 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 FAM24BQ8N5W8 94 aa10.72□□□□□ -0.69
SRGAP3-208ENST00000490348 A8MZ25 164 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 BOLA2-SMG1P6H3BVE0 249 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 CD5P06127 495 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 PLP1P60201 277 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 SELENOTP62341 195 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 RPL11P62913 178 aaKnown RBP10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 CLINT1Q14677 625 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 PATE2Q6UY27 113 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 OR1B1Q8NGR6 318 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 NARS2Q96I59 477 aaKnown RBP10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 CITED4Q96RK1 184 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 B9D2Q9BPU9 175 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 GGTLC1Q9BX51 225 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 DOK5Q9P104 306 aa10.71□□□□□ -0.69
SRGAP3-208ENST00000490348 OR4C46A6NHA9 309 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 OR11H12B2RN74 326 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 CAMLGP49069 296 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 ATP6V1FQ16864 119 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 ZNF546Q86UE3 836 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 THAP6Q8TBB0 222 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 ASB13Q8WXK3 278 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 GRAMD2BQ96HH9 432 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 UBQLN2Q9UHD9 624 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 HSPB11Q9Y547 144 aa10.7□□□□□ -0.7
SRGAP3-208ENST00000490348 RAP2BP61225 183 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 PRR20EP86478 221 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 PRR20CP86479 221 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 PRR20DP86480 221 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 PRR20BP86481 221 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 PRR20AP86496 221 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 LEMD1Q68G75 181 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 SIGLEC15Q6ZMC9 328 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 WFDC3Q8IUB2 231 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 STXBP6Q8NFX7 210 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 C17orf77Q96MU5 243 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 UHRF2Q96PU4 802 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 RBMY1BA6NDE4 496 aaKnown RBP10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 RBMY1EA6NEQ0 496 aaKnown RBP10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 ZNF98A6NK75 572 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 K7EQG2 157 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 HYPMO75409 117 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 RBMY1DP0C7P1 496 aaKnown RBP10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 FGF7P21781 194 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 ZNF124Q15973 351 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 C1orf194Q5T5A4 169 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 MIC13Q5XKP0 118 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 LINC00322Q6ZN03 302 aaPredicted RBP10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 OR2T35Q8NGX2 323 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 TMEM37Q8WXS4 190 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 SCRT1Q9BWW7 348 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 SLC25A39Q9BZJ4 359 aaPredicted RBP10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 SRD5A3Q9H8P0 318 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 WFDC1Q9HC57 220 aa10.69□□□□□ -0.7
SRGAP3-208ENST00000490348 TRAV2A0A0B4J234 112 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 HELTA6NFD8 242 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 H3BRN7 92 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 NUP62P37198 522 aaPredicted RBP10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 OPCMLQ14982 345 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 ATP5SQ99766 215 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 ASCL2Q99929 193 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 FAM110AQ9BQ89 295 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 NPCDR1Q9BY65 106 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 SMIM3Q9BZL3 60 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 HIGD1AQ9Y241 93 aa10.68□□□□□ -0.7
SRGAP3-208ENST00000490348 DNASE2O00115 360 aaPredicted RBP10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 OR5G3P0C626 314 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 RPL29P47914 159 aaKnown RBP10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 PAFAH1B2P68402 229 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 FGL1Q08830 312 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 WDR61Q9GZS3 305 aaKnown RBP10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 SLC25A32Q9H2D1 315 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 TUBA4BQ9H853 241 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 SLC25A22Q9H936 323 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 NRN1Q9NPD7 142 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 PFDN2Q9UHV9 154 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 DNAH7Q8WXX0 4024 aa10.67□□□□□ -0.7
SRGAP3-208ENST00000490348 SMLR1H3BR10 107 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 MPDU1O75352 247 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 AP2S1P53680 142 aaPredicted RBP10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 RAB31Q13636 194 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
SRGAP3-208ENST00000490348 OR8I2Q8N0Y5 310 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms