RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 SSC4DQ8WTU2 575 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 RPL36ALQ969Q0 106 aaKnown RBP7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TGFBR3LH3BV60 316 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 ZNF815PA8K554 130 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV3-48P01763 117 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 CTSBP07858 339 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 NMSQ5H8A3 153 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 ACTL10Q5JWF8 245 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 SAMD5Q5TGI4 173 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 PAQR4Q8N4S7 273 aaPredicted RBP7.31□□□□□ -1.24
LSAMP-205ENST00000490035 RASL10AQ92737 203 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TOMM7Q9P0U1 55 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV3OR2-268A0A0C4DH90 116 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 SUPT4H1P63272 117 aaKnown RBP7.31□□□□□ -1.24
LSAMP-205ENST00000490035 KIAA1549LQ6ZVL6 1849 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM178BH3BS89 294 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV1-8P0DP01 117 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 EGR1P18146 543 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM155Q4W5P6 130 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 HIST1H2BLQ99880 126 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV1D-13A0A0B4J2D9 117 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 IGKV1-13P0DP09 117 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 FAM19A2Q8N3H0 131 aa7.31□□□□□ -1.24
LSAMP-205ENST00000490035 C1orf194Q5T5A4 169 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 NEGR1Q7Z3B1 354 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 CEP192Q8TEP8 1941 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 PSG3Q16557 428 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-205ENST00000490035 CELA3AP09093 270 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 ZFAND6Q6FIF0 208 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 GGNQ86UU5 652 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV1-46P01743 117 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 TEX43Q6ZNM6 134 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 ARL6IP6Q8N6S5 226 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 DLX4Q92988 240 aaPredicted RBP7.3□□□□□ -1.24
LSAMP-205ENST00000490035 A0A1W2PRS3 328 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 EPOPA6NHQ4 379 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 B4DSR2 109 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 H3BTX0 84 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 TPTE2P1Q5T6R2 138 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 ROS1P08922 2347 aa7.3□□□□□ -1.24
LSAMP-205ENST00000490035 NABP1Q96AH0 204 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 ZNF479Q96JC4 524 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 NHP2Q9NX24 153 aaKnown RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 ABCA4P78363 2273 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 TBX6O95947 436 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 RNF166Q96A37 237 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 CELA3BP08861 270 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 SPRR3Q9UBC9 169 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 A0A0G2JMM0 328 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 A0A1W2PPB8 328 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 KIR3DP1A8MWS1 328 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 FOXL2P58012 376 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM75Q8N9X5 138 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 MBD3L4A6NDZ8 208 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 MBD3L3A6NE82 208 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 MBD3L5A6NJ08 208 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 H3BUT2 72 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 RHODO00212 210 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 MBD3L2Q8NHZ7 208 aaPredicted RBP7.29□□□□□ -1.24
LSAMP-205ENST00000490035 NOTCH3Q9UM47 2321 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 LEPROTO15243 131 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 C5orf64Q2M2E5 130 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 HIST3H2BBQ8N257 126 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 TRBV20-1A0A075B6N2 111 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 C15orf32Q32M92 178 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 LINC01551Q86U37 167 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 PKDREJQ9NTG1 2253 aa7.29□□□□□ -1.24
LSAMP-205ENST00000490035 IGHV1-3A0A0C4DH29 117 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 TIMM23O14925 209 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 ZNHIT1O43257 154 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 GAS1P54826 345 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 ASCL4Q6XD76 172 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 LINC00469Q8N7U9 141 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM8BA6NDV4 472 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 CDK2AP2O75956 126 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 FOXL2NBQ6ZUU3 175 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 A0A0A6YYD4 124 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 INSP01308 110 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 ANAPC13Q9BS18 74 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 PKIGQ9Y2B9 76 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 GVINP1Q7Z2Y8 2422 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 MYMXA0A1B0GTQ4 84 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 VMO1Q7Z5L0 202 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 SLC25A16P16260 332 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 KLF17Q5JT82 389 aaPredicted RBP7.28□□□□□ -1.24
LSAMP-205ENST00000490035 FAM90A2PQ658T7 463 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 TMEM200BQ69YZ2 307 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 BUB1B-PAK6H3BSN5 160 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 JPT2Q9H910 190 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 PSG1P11464 419 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 CCL3L1P16619 93 aa7.28□□□□□ -1.24
LSAMP-205ENST00000490035 K7EMI3 77 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 IGHV3-23P01764 117 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 ATP1A1-AS1Q5TC04 95 aa7.27□□□□□ -1.25
LSAMP-205ENST00000490035 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms