RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 OR1B1Q8NGR6 318 aa8.18□□□□□ -1.1
VPS13D-210ENST00000489961 CHAC2Q8WUX2 184 aa8.18□□□□□ -1.1
VPS13D-210ENST00000489961 ATP5SQ99766 215 aa8.18□□□□□ -1.1
VPS13D-210ENST00000489961 GGTLC1Q9BX51 225 aa8.18□□□□□ -1.1
VPS13D-210ENST00000489961 IGKV3-7A0A075B6H7 116 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 HELTA6NFD8 242 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 OR4C46A6NHA9 309 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 BUB3O43684 328 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 HYPMO75409 117 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 IFNA5P01569 189 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 OR5G3P0C626 314 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 AP2S1P53680 142 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-210ENST00000489961 CD81P60033 236 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 DEFB121Q5J5C9 76 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 C1orf194Q5T5A4 169 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 FAM90A2PQ658T7 463 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 Q6ZRG5 221 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 INO80EQ8NBZ0 244 aaPredicted RBP8.17□□□□□ -1.1
VPS13D-210ENST00000489961 GLMPQ8WWB7 406 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 AQP10Q96PS8 301 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 SMIM3Q9BZL3 60 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 ARL6Q9H0F7 186 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 DOK5Q9P104 306 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 FBXL17Q9UF56 701 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
VPS13D-210ENST00000489961 DNASE2O00115 360 aaPredicted RBP8.16□□□□□ -1.1
VPS13D-210ENST00000489961 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
VPS13D-210ENST00000489961 OPCMLQ14982 345 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 GBGT1Q8N5D6 347 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 STPG3Q8N7X2 389 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 ZNF709Q8N972 641 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 NEURL2Q9BR09 285 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 NPCDR1Q9BY65 106 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 WDR61Q9GZS3 305 aaKnown RBP8.16□□□□□ -1.1
VPS13D-210ENST00000489961 KCNIP2Q9NS61 270 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 RNF24Q9Y225 148 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
VPS13D-210ENST00000489961 ELOA3CA0A087WX78 387 aaPredicted RBP8.15□□□□□ -1.1
VPS13D-210ENST00000489961 TRAV2A0A0B4J234 112 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 C17orf112F2Z3M2 114 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 CD7P09564 240 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 TFPI2P48307 235 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 CMC4P56277 68 aaPredicted RBP8.15□□□□□ -1.1
VPS13D-210ENST00000489961 B2MP61769 119 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PRR20EP86478 221 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PRR20CP86479 221 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PRR20DP86480 221 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PRR20BP86481 221 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PRR20AP86496 221 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 MIC13Q5XKP0 118 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 SIGLEC15Q6ZMC9 328 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 OR8I2Q8N0Y5 310 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 Q8N1Y9 231 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 STXBP6Q8NFX7 210 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 OR1L4Q8NGR5 311 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 SLC25A39Q9BZJ4 359 aaPredicted RBP8.15□□□□□ -1.1
VPS13D-210ENST00000489961 ARV1Q9H2C2 271 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 MS4A6AQ9H2W1 248 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 TNFSF18Q9UNG2 199 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
VPS13D-210ENST00000489961 hCG_2014768A0A024R1R8 64 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 ZNF98A6NK75 572 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 G3V3Q6 166 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 SMLR1H3BR10 107 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 H3BRN7 92 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 ZNF266Q14584 549 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 WFDC3Q8IUB2 231 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 GPR82Q96P67 336 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 PFDN5Q99471 154 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 SHANK2-AS3Q9BTD1 123 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 PARD6GQ9BYG4 376 aaPredicted RBP8.14□□□□□ -1.11
VPS13D-210ENST00000489961 SLC25A22Q9H936 323 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 DNAJC4Q9NNZ3 241 aa8.14□□□□□ -1.11
VPS13D-210ENST00000489961 RNF222A6NCQ9 220 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 OR11H12B2RN74 326 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 ARPC5O15511 151 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 GALR1P47211 349 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 PATE2Q6UY27 113 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 LINC00305Q7Z4B0 112 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 UHRF2Q96PU4 802 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 SCRT1Q9BWW7 348 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 MFFQ9GZY8 342 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 TUBA4BQ9H853 241 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 WFDC1Q9HC57 220 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 NRN1Q9NPD7 142 aa8.13□□□□□ -1.11
VPS13D-210ENST00000489961 BORCS7-ASMTA0A0B4J1R7 106 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 K7EQG2 157 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 IGHV4-30-4P0DP06 118 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 RPL7P18124 248 aaKnown RBP8.12□□□□□ -1.11
VPS13D-210ENST00000489961 LEMD1Q68G75 181 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 GATAD1Q8WUU5 269 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 TMEM37Q8WXS4 190 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 ST6GAL2Q96JF0 529 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
VPS13D-210ENST00000489961 RSG1Q9BU20 258 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms