RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CLUHP3Q96NS8 147 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 NEU1Q99519 415 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 MAGT1Q9H0U3 335 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
TNFRSF1B-202ENST00000489921 PIGBOS1A0A0B4J2F0 54 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 IGKV3-20P01619 116 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 PSMB3P49720 205 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 FXYD7P58549 80 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 RAB11AP62491 216 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 FOXI2Q6ZQN5 318 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 DEDD2Q8WXF8 326 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 LINC00052Q96N35 136 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 RNF126Q9BV68 326 aa13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 RBM38Q9H0Z9 239 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1B-202ENST00000489921 SYNGR2O43760 224 aa13.9□□□□□ -0.18
TNFRSF1B-202ENST00000489921 PFDN2Q9UHV9 154 aa13.9□□□□□ -0.18
TNFRSF1B-202ENST00000489921 KIAA1109Q2LD37 5005 aa13.9□□□□□ -0.18
TNFRSF1B-202ENST00000489921 DEFB131BA0A096LNP1 70 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 F6UB75 175 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 WRBO00258 174 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 MED6O75586 246 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 FABP1P07148 127 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 HOXB5P09067 269 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 GGNBP1Q5YKI7 109 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 C20orf173Q96LM9 149 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SLC35B3Q9H1N7 401 aa13.89□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PKD1P98161 4303 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ISLRO14498 428 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 AMBPP02760 352 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 GATA2P23769 480 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ID1P41134 155 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PAX9P55771 341 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 OR8I2Q8N0Y5 310 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 CENPSQ8N2Z9 138 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 CIB3Q96Q77 187 aaPredicted RBP13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SLC25A32Q9H2D1 315 aa13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
TNFRSF1B-202ENST00000489921 A0A0J9YX75 114 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ID3Q02535 119 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 FAM78BQ5VT40 261 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 C1orf158Q8N1D5 194 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 OR4B1Q8NGF8 309 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SRRQ9GZT4 340 aa13.87□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PKHD1P08F94 4074 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 C9orf170A2RU37 121 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ZNF98A6NK75 572 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 A8MTW9 85 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ADAP1O75689 374 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 S100A5P33763 92 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 BAK1Q16611 211 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SPANXN5Q5MJ07 72 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 COQ8AQ8NI60 647 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SLC45A2Q9UMX9 530 aa13.86□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PMS2P5A8MQ11 134 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 H3BP45 60 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 CFDP00746 253 aaPredicted RBP13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 RPP30P78346 268 aaKnown RBP13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PSG9Q00887 426 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SPATA31B1PQ5VZV4 182 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 AMTNQ6UX39 209 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PPP1R14BQ96C90 147 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 FLVCR2Q9UPI3 526 aa13.85□□□□□ -0.19
TNFRSF1B-202ENST00000489921 IGHV3OR16-12A0A075B7B8 117 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 CCDC160A6NGH7 325 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 UBE2MP61081 183 aaKnown RBP13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 ACOT7LQ6ZUV0 252 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 OR4D5Q8NGN0 318 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SDHCQ99643 169 aaPredicted RBP13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 RSG1Q9BU20 258 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 SLC25A22Q9H936 323 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 PLA2G2EQ9NZK7 142 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 DKK2Q9UBU2 259 aa13.84□□□□□ -0.19
TNFRSF1B-202ENST00000489921 NDUFB6O95139 128 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 SPART-AS1P0CW21 52 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 ORM2P19652 201 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 EMP1P54849 157 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 POLR2GP62487 172 aaKnown RBP eCLIP13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 TMEM144Q7Z5S9 345 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 BPIFCQ8NFQ6 507 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 C16orf92Q96LL3 132 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 STRAPQ9Y3F4 350 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 RFNGQ9Y644 331 aa13.83□□□□□ -0.2
TNFRSF1B-202ENST00000489921 TRAV8-2A0A0B4J237 113 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 TMEM189A5PLL7 270 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 BTCP35070 178 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 GALR1P47211 349 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 MEOX2P50222 304 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 EBLN2Q6P2I7 272 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 NDUFAF3Q9BU61 184 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 RPRMQ9NS64 109 aa13.82□□□□□ -0.2
TNFRSF1B-202ENST00000489921 CCNKO75909 580 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 FAM222AQ5U5X8 452 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 SAMD13Q5VXD3 122 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 IGFL4Q6B9Z1 124 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 POM121L12Q8N7R1 296 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 OR1B1Q8NGR6 318 aa13.81□□□□□ -0.2
TNFRSF1B-202ENST00000489921 DOK5Q9P104 306 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms