RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 MBP02144 154 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 OR5G3P0C626 314 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 SEC11BP0C7V7 166 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 SPP1P10451 314 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 ORM2P19652 201 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 CRYBB3P26998 211 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 ACOT6Q3I5F7 207 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-221ENST00000489562 FFAR4Q5NUL3 377 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 OR1B1Q8NGR6 318 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 RNF2Q99496 336 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 SLC25A32Q9H2D1 315 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 DNAJC4Q9NNZ3 241 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 MRPL27Q9P0M9 148 aaKnown RBP10.59□□□□□ -0.71
C9orf3-221ENST00000489562 HIGD1AQ9Y241 93 aa10.59□□□□□ -0.71
C9orf3-221ENST00000489562 IGHV3OR16-8A0A075B7F1 116 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 C2orf70A6NJV1 201 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 C10orf113Q5VZT2 155 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 ST8SIA2Q92186 375 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 GRAMD2BQ96HH9 432 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
C9orf3-221ENST00000489562 SH3BGRL3Q9H299 93 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 TMEM231Q9H6L2 316 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 SIGLEC8Q9NYZ4 499 aa10.58□□□□□ -0.72
C9orf3-221ENST00000489562 IGHV7-4-1A0A0J9YVY3 117 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 C8orf88P0DMB2 117 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 CD33P20138 364 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 M6PRP20645 277 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 TM4SF20Q53R12 229 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 WFDC9Q8NEX5 89 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 PHYHIPLQ96FC7 376 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 MRPL32Q9BYC8 188 aaKnown RBP10.57□□□□□ -0.72
C9orf3-221ENST00000489562 DOK5Q9P104 306 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 SMPXQ9UHP9 88 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 U3KQE9 123 aa10.57□□□□□ -0.72
C9orf3-221ENST00000489562 UMAD1C9J7I0 102 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 ZNF207O43670 478 aaKnown RBP10.56□□□□□ -0.72
C9orf3-221ENST00000489562 CD5P06127 495 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 CSN3P07498 182 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 FOLR2P14207 255 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 CBLN1P23435 193 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 RHOBP62745 196 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 AKR1C8PQ5T2L2 129 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 C1orf194Q5T5A4 169 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 PATE2Q6UY27 113 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 TMEM37Q8WXS4 190 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 SLC25A39Q9BZJ4 359 aaPredicted RBP10.56□□□□□ -0.72
C9orf3-221ENST00000489562 VSIRQ9H7M9 311 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
C9orf3-221ENST00000489562 H3BRN7 92 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 INSL3P51460 131 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 TMEM41BQ5BJD5 291 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 IL34Q6ZMJ4 242 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 LINC00305Q7Z4B0 112 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 OR10G4Q8NGN3 311 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 TMED6Q8WW62 240 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 GPR82Q96P67 336 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 RHPN1-AS1Q9BWJ2 59 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 GPR61Q9BZJ8 451 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 TECRQ9NZ01 308 aaKnown RBP10.55□□□□□ -0.72
C9orf3-221ENST00000489562 RFNGQ9Y644 331 aa10.55□□□□□ -0.72
C9orf3-221ENST00000489562 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 ZNF98A6NK75 572 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 SEC14L6B5MCN3 397 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 CHEK1O14757 476 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 BUB3O43684 328 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 RAB5CP51148 216 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 RAB2AP61019 212 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 C9orf66Q5T8R8 295 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 DPPA3Q6W0C5 159 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 DYNLRB2Q8TF09 96 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
C9orf3-221ENST00000489562 SAP30O75446 220 aa10.53□□□□□ -0.72
C9orf3-221ENST00000489562 TAS2R45P59539 299 aa10.53□□□□□ -0.72
C9orf3-221ENST00000489562 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
C9orf3-221ENST00000489562 OR8I2Q8N0Y5 310 aa10.53□□□□□ -0.72
C9orf3-221ENST00000489562 SCRT1Q9BWW7 348 aa10.53□□□□□ -0.72
C9orf3-221ENST00000489562 ACTR3CQ9C0K3 210 aaPredicted RBP10.53□□□□□ -0.72
C9orf3-221ENST00000489562 IGHV3-49A0A0A0MS15 119 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 HELTA6NFD8 242 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 APOHP02749 345 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-221ENST00000489562 RPL7P18124 248 aaKnown RBP10.52□□□□□ -0.73
C9orf3-221ENST00000489562 CDC34P49427 236 aaPredicted RBP10.52□□□□□ -0.73
C9orf3-221ENST00000489562 ADAMTSL5Q6ZMM2 481 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 OR2K2Q8NGT1 345 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 GLMPQ8WWB7 406 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.73
C9orf3-221ENST00000489562 RPRMQ9NS64 109 aa10.52□□□□□ -0.73
C9orf3-221ENST00000489562 IGHV3OR16-13A0A075B7E8 117 aa10.51□□□□□ -0.73
C9orf3-221ENST00000489562 IGHV3-74A0A0B4J1X5 117 aa10.51□□□□□ -0.73
C9orf3-221ENST00000489562 TRAV25A0A0B4J276 109 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms