RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 UBE2CO00762 179 aa12.85□□□□□ -0.35
MDC1-206ENST00000489540 SSNA1O43805 119 aa12.85□□□□□ -0.35
MDC1-206ENST00000489540 SIX6O95475 246 aa12.85□□□□□ -0.35
MDC1-206ENST00000489540 PTTG1O95997 202 aa12.85□□□□□ -0.35
MDC1-206ENST00000489540 DEFB131AP59861 70 aa12.85□□□□□ -0.35
MDC1-206ENST00000489540 LYRM2Q9NU23 88 aaPredicted RBP12.85□□□□□ -0.35
MDC1-206ENST00000489540 ORM2P19652 201 aa12.84□□□□□ -0.35
MDC1-206ENST00000489540 GATA2P23769 480 aaPredicted RBP12.84□□□□□ -0.35
MDC1-206ENST00000489540 TMEM182Q6ZP80 229 aaPredicted RBP12.84□□□□□ -0.35
MDC1-206ENST00000489540 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
MDC1-206ENST00000489540 SEPSECSQ9HD40 501 aaKnown RBP12.84□□□□□ -0.35
MDC1-206ENST00000489540 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
MDC1-206ENST00000489540 S100A11P31949 105 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 SULT1A1P50225 295 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 SLC38A11Q08AI6 406 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 OR8I2Q8N0Y5 310 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 TMEM252Q8N6L7 170 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 STPG3Q8N7X2 389 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 COL7A1Q02388 2944 aa12.83□□□□□ -0.36
MDC1-206ENST00000489540 CST7O76096 145 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 PLP1P60201 277 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 SNRPD3P62318 126 aaKnown RBP12.82□□□□□ -0.36
MDC1-206ENST00000489540 HBG1P69891 147 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 HBG2P69892 147 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 ZNF124Q15973 351 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 STX12Q86Y82 276 aa12.82□□□□□ -0.36
MDC1-206ENST00000489540 E5RGE8 158 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 HYPMO75409 117 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 ZNF688P0C7X2 276 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 RPL35AP18077 110 aaKnown RBP12.81□□□□□ -0.36
MDC1-206ENST00000489540 RAP2BP61225 183 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 RAB31Q13636 194 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 LEMD1Q68G75 181 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 Q6ZWC4 215 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 TMEM217Q8N7C4 229 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 RETNQ9HD89 108 aa12.81□□□□□ -0.36
MDC1-206ENST00000489540 ZNF98A6NK75 572 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 LINC00869P0C866 280 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 H2BFSP57053 126 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 ATP6V1FQ16864 119 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 PXDC1Q5TGL8 231 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 ZNF546Q86UE3 836 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 GPR82Q96P67 336 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 SLC25A31Q9H0C2 315 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 CSTL1Q9H114 145 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 UQCC1Q9NVA1 299 aa12.8□□□□□ -0.36
MDC1-206ENST00000489540 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 AGPAT2O15120 278 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 GALR1P47211 349 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 VWC2Q2TAL6 325 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 SAMD13Q5VXD3 122 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 RNF24Q9Y225 148 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 HIGD1AQ9Y241 93 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 TP53TG1Q9Y2A0 90 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 ID1P41134 155 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 RGS21Q2M5E4 152 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 LRRC37A5PQ49AS3 106 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 PSMG4Q5JS54 123 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 STHQ8IWL8 128 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 PPP1R1CQ8WVI7 109 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 SLC25A39Q9BZJ4 359 aaPredicted RBP12.79□□□□□ -0.36
MDC1-206ENST00000489540 SLC25A22Q9H936 323 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 DOK5Q9P104 306 aa12.79□□□□□ -0.36
MDC1-206ENST00000489540 SPRY2O43597 315 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 OR5G3P0C626 314 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 PET100P0DJ07 73 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 STAB2Q8WWQ8 2551 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 MGST2Q99735 147 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 SHANK2-AS3Q9BTD1 123 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 ARL6Q9H0F7 186 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 EDA2RQ9HAV5 297 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 WDR83OSQ9Y284 106 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 ALG5Q9Y673 324 aa12.78□□□□□ -0.36
MDC1-206ENST00000489540 A0A1B0GVG6 124 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 H0YIZ8 118 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 H3BRN7 92 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 CAMLGP49069 296 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 MEOX2P50222 304 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 Q6ZNX1 250 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 RNF183Q96D59 192 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 SLC25A32Q9H2D1 315 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.37
MDC1-206ENST00000489540 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 PFDN1O60925 122 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 RPL7P18124 248 aaKnown RBP12.76□□□□□ -0.37
MDC1-206ENST00000489540 PSMB3P49720 205 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 NHLH2Q02577 135 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 ACTL10Q5JWF8 245 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 Q6ZRG5 221 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 MUC7Q8TAX7 377 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 RSG1Q9BU20 258 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 RNF126Q9BV68 326 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 SCRT1Q9BWW7 348 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 ARV1Q9H2C2 271 aa12.76□□□□□ -0.37
MDC1-206ENST00000489540 ELOA3CA0A087WX78 387 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms