RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 STPG3Q8N7X2 389 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 DCANP1Q8TF63 244 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 C11orf1Q9H5F2 150 aa11.65□□□□□ -0.54
LMX1A-204ENST00000489443 AGRNO00468 2067 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 FNDC10F2Z333 226 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 SLC38A11Q08AI6 406 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 OR1B1Q8NGR6 318 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 GGACTQ9BVM4 153 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 NRN1Q9NPD7 142 aa11.64□□□□□ -0.55
LMX1A-204ENST00000489443 SELENOTP62341 195 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 OR8I2Q8N0Y5 310 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 TMEM147Q9BVK8 224 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 NMES1Q9C002 83 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
LMX1A-204ENST00000489443 DOK5Q9P104 306 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 FBXL17Q9UF56 701 aa11.63□□□□□ -0.55
LMX1A-204ENST00000489443 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 RLN2P04090 185 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 CYCSP99999 105 aaKnown RBP11.62□□□□□ -0.55
LMX1A-204ENST00000489443 LRRC37A5PQ49AS3 106 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 STX12Q86Y82 276 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 KIR2DL5BQ8NHK3 375 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 SLC25A22Q9H936 323 aa11.62□□□□□ -0.55
LMX1A-204ENST00000489443 ZNF98A6NK75 572 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 UBE2CO00762 179 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 HYPMO75409 117 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 PTTG1O95997 202 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 LINC00869P0C866 280 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 SULT1A1P50225 295 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 H2BFSP57053 126 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 SNRPD3P62318 126 aaKnown RBP11.61□□□□□ -0.55
LMX1A-204ENST00000489443 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 STHQ8IWL8 128 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 TMEM252Q8N6L7 170 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 CSTL1Q9H114 145 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 SLC45A2Q9UMX9 530 aa11.61□□□□□ -0.55
LMX1A-204ENST00000489443 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 AGPAT2O15120 278 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 OR5G3P0C626 314 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 S100A7P31151 101 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 S100A11P31949 105 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 RAP2BP61225 183 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 Q6ZWC4 215 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 OVOL2Q9BRP0 275 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 ARL6Q9H0F7 186 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 UQCC1Q9NVA1 299 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 OR5AC2Q9NZP5 309 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 HIGD1AQ9Y241 93 aa11.6□□□□□ -0.55
LMX1A-204ENST00000489443 E5RGE8 158 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 SPRY2O43597 315 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 GALR1P47211 349 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 HBG1P69891 147 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 HBG2P69892 147 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 RAB31Q13636 194 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 ACTL10Q5JWF8 245 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 ZNF546Q86UE3 836 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 MUC7Q8TAX7 377 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 MGST2Q99735 147 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 RSG1Q9BU20 258 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 SCRT1Q9BWW7 348 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 SLC25A39Q9BZJ4 359 aaPredicted RBP11.59□□□□□ -0.55
LMX1A-204ENST00000489443 SLC25A32Q9H2D1 315 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 ALG5Q9Y673 324 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 TENM2Q9NT68 2774 aa11.59□□□□□ -0.55
LMX1A-204ENST00000489443 H0YIZ8 118 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 ID1P41134 155 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 CAMLGP49069 296 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 PLP1P60201 277 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 PPP1R1CQ8WVI7 109 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 LINC00052Q96N35 136 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 UHRF2Q96PU4 802 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
LMX1A-204ENST00000489443 SEPSECSQ9HD40 501 aaKnown RBP11.58□□□□□ -0.56
LMX1A-204ENST00000489443 UBE2L5PA0A1B0GUS4 154 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 H3BRN7 92 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 CA1P00915 261 aaPredicted RBP11.57□□□□□ -0.56
LMX1A-204ENST00000489443 NHLH2Q02577 135 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 BAXQ07812 192 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 PATE2Q6UY27 113 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 RNF183Q96D59 192 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 SLC25A31Q9H0C2 315 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
LMX1A-204ENST00000489443 C3orf84H3BNL1 204 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 COX7A2P2O60397 106 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 EWSR1Q01844 656 aaKnown RBP eCLIP11.56□□□□□ -0.56
LMX1A-204ENST00000489443 ATP6V1FQ16864 119 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 VWC2Q2TAL6 325 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 PXDC1Q5TGL8 231 aa11.56□□□□□ -0.56
LMX1A-204ENST00000489443 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
LMX1A-204ENST00000489443 GPR82Q96P67 336 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms