RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TMEM235A6NFC5 223 aa7.6□□□□□ -1.19
HDAC6-233ENST00000489352 CASQ2O14958 399 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-233ENST00000489352 ZNF324O75467 553 aaPredicted RBP7.6□□□□□ -1.19
HDAC6-233ENST00000489352 TOMM40O96008 361 aa7.6□□□□□ -1.19
HDAC6-233ENST00000489352 SLC25A4P12235 298 aa7.6□□□□□ -1.19
HDAC6-233ENST00000489352 SUPT4H1P63272 117 aaKnown RBP7.6□□□□□ -1.19
HDAC6-233ENST00000489352 C1orf194Q5T5A4 169 aa7.6□□□□□ -1.19
HDAC6-233ENST00000489352 SLC24A4Q8NFF2 622 aa7.6□□□□□ -1.19
HDAC6-233ENST00000489352 PSG1P11464 419 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 S100GP29377 79 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 TNFSF8P32971 234 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 ZNF415Q09FC8 603 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 SLAQ13239 276 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 C1orf146Q5VVC0 180 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 OR8G2PQ6IF36 304 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 Q6ZTI0 123 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 NANOGP1Q8N7R0 232 aa7.59□□□□□ -1.19
HDAC6-233ENST00000489352 RRP15Q9Y3B9 282 aaKnown RBP7.59□□□□□ -1.19
HDAC6-233ENST00000489352 FSIP2Q5CZC0 6907 aa7.59□□□□□ -1.2
HDAC6-233ENST00000489352 LECT2O14960 151 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 SRIP30626 198 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 GALR1P47211 349 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 PRSS54Q6PEW0 395 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 ACY3Q96HD9 319 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 SEC22AQ96IW7 307 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 PRO0255Q9UI72 69 aa7.58□□□□□ -1.2
HDAC6-233ENST00000489352 IBA57-AS1B1ANH7 110 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 INS-IGF2F8WCM5 200 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 PRAF2O60831 178 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 OR5AC1P0C628 307 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 GYPEP15421 78 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 HIST1H1AQ02539 215 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-233ENST00000489352 PSG3Q16557 428 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 MORN5Q5VZ52 161 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 ZNF738Q8NE65 137 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 NPIPB3Q92617 1050 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 PAXXQ9BUH6 204 aa7.57□□□□□ -1.2
HDAC6-233ENST00000489352 IGHV3-38A0A0C4DH36 116 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 C9JCJ5 164 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 PDCD5O14737 125 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 SSX5O60225 188 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
HDAC6-233ENST00000489352 ODF1Q14990 250 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 PCNPQ8WW12 178 aaKnown RBP7.56□□□□□ -1.2
HDAC6-233ENST00000489352 UFD1Q92890 307 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 MRGPRFQ96AM1 343 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 C20orf144Q9BQM9 153 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 RSG1Q9BU20 258 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 HHLA3Q9XRX5 114 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 FUT9Q9Y231 359 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 LPAP08519 4548 aa7.56□□□□□ -1.2
HDAC6-233ENST00000489352 TRGV1A0A0A0MS02 117 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 GPR31O00270 319 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 SCGNO76038 276 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 HTR2BP41595 481 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 FGL1Q08830 312 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 WFDC2Q14508 124 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 TRAM1Q15629 374 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 AHSA2Q719I0 299 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 C9orf16Q9BUW7 83 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 MND1Q9BWT6 205 aa7.55□□□□□ -1.2
HDAC6-233ENST00000489352 A0A0D9SG52 128 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 IFITM5A6NNB3 132 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 E5RGE8 158 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 IGHV3-53P01767 116 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 HSMCR30P0CW71 290 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 CRYBA4P53673 196 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 LYZP61626 148 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 IZUMO4Q1ZYL8 232 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 FFAR4Q5NUL3 377 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 TMEM91Q6ZNR0 172 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 HOGA1Q86XE5 327 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 RNF182Q8N6D2 247 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 RNASEH2CQ8TDP1 164 aaKnown RBP7.54□□□□□ -1.2
HDAC6-233ENST00000489352 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 SLC25A22Q9H936 323 aa7.54□□□□□ -1.2
HDAC6-233ENST00000489352 CIB2O75838 187 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 FABP1P07148 127 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 OR2F1Q13607 317 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 SPHARQ15513 63 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 PHLDA2Q53GA4 152 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 IGFL4Q6B9Z1 124 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 OR5AP2Q8NGF4 316 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 PYDC1Q8WXC3 89 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 TXNDC17Q9BRA2 123 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 ZNF2Q9BSG1 426 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-233ENST00000489352 HEYLQ9NQ87 328 aaPredicted RBP7.53□□□□□ -1.2
HDAC6-233ENST00000489352 DIABLOQ9NR28 239 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 EHFQ9NZC4 300 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 BOLA1Q9Y3E2 137 aa7.53□□□□□ -1.2
HDAC6-233ENST00000489352 ZFP92A6NM28 416 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 SNRPGP15A8MWD9 76 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 ANKRD65E5RJM6 399 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 CCNKO75909 580 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 PSMA1P25786 263 aaKnown RBP7.52□□□□□ -1.21
HDAC6-233ENST00000489352 AKR1C2P52895 323 aa7.52□□□□□ -1.21
HDAC6-233ENST00000489352 TAS2R20P59543 309 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms