RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 DPF1Q92782 380 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 ZNF747Q9BV97 191 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 MRPL32Q9BYC8 188 aaKnown RBP12.25□□□□□ -0.45
CLDN11-208ENST00000488989 HIGD1AQ9Y241 93 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 U3KQE9 123 aa12.25□□□□□ -0.45
CLDN11-208ENST00000488989 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 A8MWP6 167 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 CCL24O00175 119 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 MYCNOSP40205 109 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 RHOBP62745 196 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 ZNF726P1Q15940 193 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 SAT2Q96F10 170 aaPredicted RBP12.24□□□□□ -0.45
CLDN11-208ENST00000488989 PBDC1Q9BVG4 233 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 ACTR3CQ9C0K3 210 aaPredicted RBP12.24□□□□□ -0.45
CLDN11-208ENST00000488989 WNK1Q9H4A3 2382 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 DOK5Q9P104 306 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
CLDN11-208ENST00000488989 TENM1Q9UKZ4 2725 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 H3BRN7 92 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 CRYBB3P26998 211 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
CLDN11-208ENST00000488989 FHITP49789 147 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 SLURP1P55000 103 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 NSUN5P1Q3KNT7 163 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 FAM78BQ5VT40 261 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 FAM122CQ6P4D5 195 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 LINC00305Q7Z4B0 112 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 MBD3L1Q8WWY6 194 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
CLDN11-208ENST00000488989 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
CLDN11-208ENST00000488989 TECRQ9NZ01 308 aaKnown RBP12.23□□□□□ -0.45
CLDN11-208ENST00000488989 FUT9Q9Y231 359 aa12.23□□□□□ -0.45
CLDN11-208ENST00000488989 S100A7P31151 101 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 SPATA31B1PQ5VZV4 182 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 MIR17HGQ75NE6 70 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 FAM213BQ8TBF2 198 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 DUX3Q96PT4 197 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 UHRF2Q96PU4 802 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 METTL26Q96S19 204 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 SHANK2-AS3Q9BTD1 123 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 DAZ1Q9NQZ3 744 aaKnown RBP12.22□□□□□ -0.45
CLDN11-208ENST00000488989 UFC1Q9Y3C8 167 aa12.22□□□□□ -0.45
CLDN11-208ENST00000488989 IGHV3OR16-8A0A075B7F1 116 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 A0A1W2PPV4 95 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 TMEM213A2RRL7 107 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
CLDN11-208ENST00000488989 STAG3L2P0CL84 134 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 STAG3L3P0CL85 134 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 C8orf88P0DMB2 117 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 NPPCP23582 126 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 SYNJ2BPP57105 145 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 BLOC1S1P78537 153 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 MORN5Q5VZ52 161 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 SSX7Q7RTT5 188 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 FAM167A-AS1Q96KT0 104 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 SLC25A22Q9H936 323 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 RNF24Q9Y225 148 aa12.21□□□□□ -0.45
CLDN11-208ENST00000488989 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 ZNF320A2RRD8 509 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 ZNF98A6NK75 572 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 BUB3O43684 328 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 NMBP08949 121 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 C12orf54Q6X4T0 127 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 DLX4Q92988 240 aaPredicted RBP12.2□□□□□ -0.46
CLDN11-208ENST00000488989 PFDN2Q9UHV9 154 aa12.2□□□□□ -0.46
CLDN11-208ENST00000488989 IGHV7-4-1A0A0J9YVY3 117 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 ZNF207O43670 478 aaKnown RBP12.19□□□□□ -0.46
CLDN11-208ENST00000488989 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 TAS2R45P59539 299 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 TM4SF20Q53R12 229 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 CLLU1Q5K131 121 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 SCRT1Q9BWW7 348 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 SLC25A2Q9BXI2 301 aa12.19□□□□□ -0.46
CLDN11-208ENST00000488989 TRAV5A0A0B4J249 113 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 MAP1LC3B2A6NCE7 125 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 C2orf70A6NJV1 201 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 MRPS12O15235 138 aaKnown RBP12.18□□□□□ -0.46
CLDN11-208ENST00000488989 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
CLDN11-208ENST00000488989 KHDC3LQ587J8 217 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 SHISA2Q6UWI4 295 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 PQLC2Q6ZP29 291 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 OR4F17Q8NGA8 305 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 OR9G4Q8NGQ1 327 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 MARC2Q969Z3 335 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 ZNF503Q96F45 646 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 OR4F4Q96R69 305 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 MAP1LC3BQ9GZQ8 125 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 PEMTQ9UBM1 199 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 SMPXQ9UHP9 88 aa12.18□□□□□ -0.46
CLDN11-208ENST00000488989 COL6A5A8TX70 2615 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 A0A1W2PS18 150 aa12.17□□□□□ -0.46
CLDN11-208ENST00000488989 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms