RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CFHR3Q02985 330 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 ECSCRQ19T08 205 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 ASPHD1Q5U4P2 390 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 SLC16A13Q7RTY0 426 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 ANAPC16Q96DE5 110 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 FAM210BQ96KR6 192 aa15.11■□□□□ 0.01
CCM2-216ENST00000488727 SEPSECSQ9HD40 501 aaKnown RBP15.11■□□□□ 0.01
CCM2-216ENST00000488727 IGKV1OR2-108A0A075B7D4 117 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 TRAV41A0A0B4J266 112 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 APELAP0DMC3 54 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 UBE2G2P60604 165 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 CST9LP1Q5W188 147 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 HIST2H2BDQ6DRA6 164 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 C12orf54Q6X4T0 127 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 PYGO2Q9BRQ0 406 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 FUT9Q9Y231 359 aa15.1■□□□□ 0.01
CCM2-216ENST00000488727 PSMB11A5LHX3 300 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 PPIFP30405 207 aaKnown RBP15.09■□□□□ 0.01
CCM2-216ENST00000488727 RPL27AP46776 148 aaKnown RBP15.09■□□□□ 0.01
CCM2-216ENST00000488727 SUB1P53999 127 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCM2-216ENST00000488727 SPATA31B1PQ5VZV4 182 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 TEX22C9J3V5 150 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 S100A8P05109 93 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 PFN1P07737 140 aaKnown RBP15.09■□□□□ 0.01
CCM2-216ENST00000488727 OR5G3P0C626 314 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 OR10J1P30954 320 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 WT1-ASQ06250 92 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 KIAA0141Q14154 515 aaPredicted RBP15.09■□□□□ 0.01
CCM2-216ENST00000488727 PVRIGQ6DKI7 326 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 UNQ5815/PRO19632Q6UWF5 114 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 OR5AU1Q8NGC0 362 aa15.09■□□□□ 0.01
CCM2-216ENST00000488727 H7BYZ3 331 aa15.08■□□□□ 0
CCM2-216ENST00000488727 FABP9Q0Z7S8 132 aa15.08■□□□□ 0
CCM2-216ENST00000488727 TCTEX1D4Q5JR98 221 aa15.08■□□□□ 0
CCM2-216ENST00000488727 MRPL41Q8IXM3 137 aaKnown RBP15.08■□□□□ 0
CCM2-216ENST00000488727 C11orf44Q8N8P7 122 aa15.08■□□□□ 0
CCM2-216ENST00000488727 C11orf52Q96A22 123 aa15.08■□□□□ 0
CCM2-216ENST00000488727 ZNF98A6NK75 572 aa15.07■□□□□ 0
CCM2-216ENST00000488727 AREGP15514 252 aa15.07■□□□□ 0
CCM2-216ENST00000488727 FAM78BQ5VT40 261 aa15.07■□□□□ 0
CCM2-216ENST00000488727 LINC01551Q86U37 167 aa15.07■□□□□ 0
CCM2-216ENST00000488727 OR51G1Q8NGK1 321 aa15.07■□□□□ 0
CCM2-216ENST00000488727 YTHDF2Q9Y5A9 579 aaKnown RBP15.07■□□□□ 0
CCM2-216ENST00000488727 CD28P10747 220 aa15.06■□□□□ 0
CCM2-216ENST00000488727 SLC35B1P78383 322 aa15.06■□□□□ 0
CCM2-216ENST00000488727 C3orf56Q8N813 242 aa15.06■□□□□ 0
CCM2-216ENST00000488727 ZNF114Q8NC26 417 aa15.06■□□□□ 0
CCM2-216ENST00000488727 RNF2Q99496 336 aa15.06■□□□□ 0
CCM2-216ENST00000488727 ZNF747Q9BV97 191 aa15.06■□□□□ 0
CCM2-216ENST00000488727 MRPL32Q9BYC8 188 aaKnown RBP15.06■□□□□ 0
CCM2-216ENST00000488727 TMEM167BQ9NRX6 74 aa15.06■□□□□ 0
CCM2-216ENST00000488727 TECRQ9NZ01 308 aaKnown RBP15.06■□□□□ 0
CCM2-216ENST00000488727 NDUFB4O95168 129 aa15.06■□□□□ 0
CCM2-216ENST00000488727 IGHG4P01861 327 aa15.06■□□□□ 0
CCM2-216ENST00000488727 S100PP25815 95 aa15.06■□□□□ 0
CCM2-216ENST00000488727 LCNL1Q6ZST4 164 aa15.06■□□□□ 0
CCM2-216ENST00000488727 MIR17HGQ75NE6 70 aa15.06■□□□□ 0
CCM2-216ENST00000488727 THAP8Q8NA92 274 aa15.06■□□□□ 0
CCM2-216ENST00000488727 OR5B12Q96R08 314 aa15.06■□□□□ 0
CCM2-216ENST00000488727 CITED1Q99966 193 aa15.06■□□□□ 0
CCM2-216ENST00000488727 TCEAL7Q9BRU2 100 aa15.06■□□□□ 0
CCM2-216ENST00000488727 IGLV1-40P01703 118 aa15.05■□□□□ -0
CCM2-216ENST00000488727 GALR1P47211 349 aa15.05■□□□□ -0
CCM2-216ENST00000488727 MEOX2P50222 304 aa15.05■□□□□ -0
CCM2-216ENST00000488727 MLANAQ16655 118 aa15.05■□□□□ -0
CCM2-216ENST00000488727 PQLC2Q6ZP29 291 aa15.05■□□□□ -0
CCM2-216ENST00000488727 OR5T1Q8NG75 326 aa15.05■□□□□ -0
CCM2-216ENST00000488727 IGLC7A0M8Q6 106 aa15.04■□□□□ -0
CCM2-216ENST00000488727 PSMB8P28062 276 aa15.04■□□□□ -0
CCM2-216ENST00000488727 TAS2R45P59539 299 aa15.04■□□□□ -0
CCM2-216ENST00000488727 TEX38Q6PEX7 206 aa15.04■□□□□ -0
CCM2-216ENST00000488727 OR4X2Q8NGF9 303 aa15.04■□□□□ -0
CCM2-216ENST00000488727 TMEM68Q96MH6 324 aa15.04■□□□□ -0
CCM2-216ENST00000488727 C12orf57Q99622 126 aa15.04■□□□□ -0
CCM2-216ENST00000488727 FNDC4Q9H6D8 234 aaPredicted RBP15.04■□□□□ -0
CCM2-216ENST00000488727 SRD5A3Q9H8P0 318 aa15.04■□□□□ -0
CCM2-216ENST00000488727 SCO2A0A1W2PP80 73 aa15.03■□□□□ -0
CCM2-216ENST00000488727 PHOX2AO14813 284 aa15.03■□□□□ -0
CCM2-216ENST00000488727 PPP1R2P9O14990 202 aa15.03■□□□□ -0
CCM2-216ENST00000488727 TRGC2P03986 189 aa15.03■□□□□ -0
CCM2-216ENST00000488727 SMIM6P0DI80 62 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HOXA5P20719 270 aa15.03■□□□□ -0
CCM2-216ENST00000488727 C19orf35Q6ZS72 473 aa15.03■□□□□ -0
CCM2-216ENST00000488727 UHRF2Q96PU4 802 aa15.03■□□□□ -0
CCM2-216ENST00000488727 DERL1Q9BUN8 251 aa15.03■□□□□ -0
CCM2-216ENST00000488727 KLK15Q9H2R5 256 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BKO60814 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BJP06899 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BOP23527 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BBP33778 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BDP58876 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BCP62807 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 FOXE3Q13461 319 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST2H2BEQ16778 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.03■□□□□ -0
CCM2-216ENST00000488727 TTC9CQ8N5M4 171 aa15.03■□□□□ -0
CCM2-216ENST00000488727 FAM110DQ8TAY7 271 aaPredicted RBP15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BHQ93079 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BNQ99877 126 aa15.03■□□□□ -0
CCM2-216ENST00000488727 HIST1H2BMQ99879 126 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms