RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SPP1P10451 314 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 C1orf194Q5T5A4 169 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 MORN3Q6PF18 240 aaPredicted RBP17.35■□□□□ 0.37
RNF38-208ENST00000488058 TMEM14EPQ6UXP3 125 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 GSG1LQ6UXU4 331 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 TMEM217Q8N7C4 229 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 OR10P1Q8NGE3 313 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 OR1B1Q8NGR6 318 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 WDR12Q9GZL7 423 aaKnown RBP17.35■□□□□ 0.37
RNF38-208ENST00000488058 PTTG2Q9NZH5 202 aa17.35■□□□□ 0.37
RNF38-208ENST00000488058 LSM5Q9Y4Y9 91 aaKnown RBP17.35■□□□□ 0.37
RNF38-208ENST00000488058 L7N2F9 121 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 TSC22D2O75157 780 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 VAMP2P63027 116 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 DLK1P80370 383 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 ASAH1Q13510 395 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 CYP2G1PQ6ZSU1 146 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 LINC00052Q96N35 136 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 TMEM147Q9BVK8 224 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 DOK5Q9P104 306 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 MGAT4CQ9UBM8 478 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 STARD9Q9P2P6 4700 aa17.34■□□□□ 0.37
RNF38-208ENST00000488058 RYR3Q15413 4870 aa17.33■□□□□ 0.37
RNF38-208ENST00000488058 IL5P05113 134 aa17.33■□□□□ 0.36
RNF38-208ENST00000488058 C4BPBP20851 252 aa17.33■□□□□ 0.36
RNF38-208ENST00000488058 TAS2R30P59541 319 aa17.33■□□□□ 0.36
RNF38-208ENST00000488058 SEPSECSQ9HD40 501 aaKnown RBP17.33■□□□□ 0.36
RNF38-208ENST00000488058 C7orf66A4D0T2 115 aa17.32■□□□□ 0.36
RNF38-208ENST00000488058 ID1P41134 155 aa17.32■□□□□ 0.36
RNF38-208ENST00000488058 ENKURQ8TC29 256 aa17.32■□□□□ 0.36
RNF38-208ENST00000488058 ZNF98A6NK75 572 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 DEFB4AO15263 64 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 UPK1BO75841 260 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 BCAP31P51572 246 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 SLC25A32Q9H2D1 315 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 CLEC5AQ9NY25 188 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 SLC45A2Q9UMX9 530 aa17.31■□□□□ 0.36
RNF38-208ENST00000488058 K7EPK0 472 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 JTBO76095 146 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 GIG44P09565 113 aaPredicted RBP17.3■□□□□ 0.36
RNF38-208ENST00000488058 S100A7P31151 101 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 GALR1P47211 349 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 DEFB1P60022 68 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 TMEM41BQ5BJD5 291 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 C2orf50Q96LR7 162 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 NPVFQ9HCQ7 196 aa17.3■□□□□ 0.36
RNF38-208ENST00000488058 DYNC2H1Q8NCM8 4307 aaKnown RBP17.29■□□□□ 0.36
RNF38-208ENST00000488058 LINC00869P0C866 280 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 PSMB3P49720 205 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 S100A10P60903 97 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 RAP2BP61225 183 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 ARL16Q0P5N6 197 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 SCRT1Q9BWW7 348 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 TENM2Q9NT68 2774 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 CSMD3Q7Z407 3707 aa17.29■□□□□ 0.36
RNF38-208ENST00000488058 H3BMM0 161 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 SOCS3O14543 225 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 IGKV3-20P01619 116 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 OR5G3P0C626 314 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 CAV2P51636 162 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 SLC38A11Q08AI6 406 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 RSG1Q9BU20 258 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 HIGD1AQ9Y241 93 aa17.28■□□□□ 0.36
RNF38-208ENST00000488058 NUPR2A6NF83 97 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 FNDC10F2Z333 226 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 HLA-DRB4P13762 266 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 ATF4P18848 351 aaPredicted RBP17.27■□□□□ 0.36
RNF38-208ENST00000488058 NUTF2P61970 127 aaKnown RBP17.27■□□□□ 0.36
RNF38-208ENST00000488058 SELENOTP62341 195 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 GDF5OSQ5U4N7 250 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 TEPPQ6URK8 271 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 C16orf92Q96LL3 132 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 C11orf68Q9H3H3 251 aaKnown RBP17.27■□□□□ 0.36
RNF38-208ENST00000488058 HLA-DRB4X5D2U9 266 aa17.27■□□□□ 0.36
RNF38-208ENST00000488058 ISLRO14498 428 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 HYPMO75409 117 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 PVALBP20472 110 aaPredicted RBP17.26■□□□□ 0.35
RNF38-208ENST00000488058 MEOX2P50222 304 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 IFITM3Q01628 133 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 C11orf45Q8TAV5 145 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 SLC25A39Q9BZJ4 359 aaPredicted RBP17.26■□□□□ 0.35
RNF38-208ENST00000488058 GPN1Q9HCN4 374 aaPredicted RBP17.26■□□□□ 0.35
RNF38-208ENST00000488058 XCL2Q9UBD3 114 aa17.26■□□□□ 0.35
RNF38-208ENST00000488058 FAM24AA6NFZ4 105 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 H3BRN7 92 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 FGL1Q08830 312 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 GPR82Q96P67 336 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 UHRF2Q96PU4 802 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 ARL6Q9H0F7 186 aa17.25■□□□□ 0.35
RNF38-208ENST00000488058 SAV1Q9H4B6 383 aaPredicted RBP17.25■□□□□ 0.35
RNF38-208ENST00000488058 GOSR2O14653 212 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 CST7O76096 145 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 FXYD7P58549 80 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 NANOS2P60321 138 aaKnown RBP17.24■□□□□ 0.35
RNF38-208ENST00000488058 RAB32Q13637 225 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 SAMD13Q5VXD3 122 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 CEMP1Q6PRD7 247 aaPredicted RBP17.24■□□□□ 0.35
RNF38-208ENST00000488058 FOXI2Q6ZQN5 318 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 OR4B1Q8NGF8 309 aa17.24■□□□□ 0.35
RNF38-208ENST00000488058 SHANK2-AS3Q9BTD1 123 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms