RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 C17orf98A8MV24 154 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 GPR31O00270 319 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ITGB1BP1O14713 200 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SSNA1O43805 119 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CREBL2O60519 120 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 PGLYRP1O75594 196 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SFT2D2O95562 160 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 IGLV2-23P01705 113 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 OR8U9P0C7N5 309 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CCL3L1P16619 93 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 AKR1C4P17516 323 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 HLA-GP17693 338 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 OMGP23515 440 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SSTR5P35346 364 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 PPP1CCP36873 323 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CXCL5P42830 114 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ATP5J2P56134 94 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 DLX6P56179 175 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 PIGPP57054 158 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SUPT4H1P63272 117 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 FLI1Q01543 452 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 DHRS2Q13268 280 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 PPP1R1AQ13522 171 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF266Q14584 549 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 MSMO1Q15800 293 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 POU2AF1Q16633 256 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 Q3ZCU0 254 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ABCA11PQ4W5N1 156 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 HEPN1Q6WQI6 88 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF818PQ6ZRF7 136 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 LYG2Q86SG7 212 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CBLN2Q8IUK8 224 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SGPP2Q8IWX5 399 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 VKORC1L1Q8N0U8 176 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 C12orf45Q8N5I9 185 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF680Q8NEM1 530 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 OR8U1Q8NH10 309 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 CD300LFQ8TDQ1 290 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 C10orf105Q8TEF2 133 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 RTN4IP1Q8WWV3 396 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 H1FXQ92522 213 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 RBPMSQ93062 196 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 GALNT14Q96FL9 552 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF714Q96N38 554 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SEC22CQ9BRL7 303 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 AGMATQ9BSE5 352 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF436Q9C0F3 470 aaPredicted RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 BPESC1Q9GZL8 116 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 FXYD6Q9H0Q3 95 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 MED28Q9H204 178 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 SLC2A9Q9NRM0 540 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 RPUSD1Q9UJJ7 312 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 C14orf166Q9Y224 244 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 HSPB11Q9Y547 144 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 RBM7Q9Y580 266 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 TACC2O95359 2948 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 AGRNO00468 2067 aa2.73□□□□□ -1.97
PTCD3-216ENST00000487043 GCN1Q92616 2671 aaKnown RBP2.73□□□□□ -1.97
PTCD3-216ENST00000487043 COL12A1Q99715 3063 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 DOCK11Q5JSL3 2073 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 IGHV3-43A0A0B4J1X8 118 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 C3orf85A0A1B0GTC6 90 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CRYM-AS1A6NIL9 109 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 H7C1H1 209 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 H7C2Y5 167 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CD5LO43866 347 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF861PO60384 105 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 MPDU1O75352 247 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 FOXH1O75593 365 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 OR2A4O95047 310 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CDS2O95674 445 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 OXTP01178 125 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 HLA-AP01891 365 aaKnown RBP2.72□□□□□ -1.97
PTCD3-216ENST00000487043 RBP4P02753 201 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SULT1A3P0DMM9 295 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SULT1A4P0DMN0 295 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 IGHV1-8P0DP01 117 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SLC25A16P16260 332 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CXCL3P19876 107 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 RAB4AP20338 218 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 NFYBP25208 207 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CD34P28906 385 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 S100GP29377 79 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 RPS10P46783 165 aaKnown RBP2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF138P52744 262 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 EIF4EBP1Q13541 118 aaPredicted RBP2.72□□□□□ -1.97
PTCD3-216ENST00000487043 LTC4SQ16873 150 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 DEFB113Q30KQ7 82 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 MALRD1Q5VYJ5 2156 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 COMMD7Q86VX2 200 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 SPAG16Q8N0X2 631 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 EIF4E3Q8N5X7 224 aaKnown RBP2.72□□□□□ -1.97
PTCD3-216ENST00000487043 LINC00311Q8N616 119 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 DRAM1Q8N682 238 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF645Q8N7E2 425 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 TCTEX1D1Q8N7M0 179 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 ZNF439Q8NDP4 499 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 OR11H7Q8NGC8 314 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 CLDND2Q8NHS1 167 aa2.72□□□□□ -1.97
PTCD3-216ENST00000487043 COQ8AQ8NI60 647 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 530.6 ms