RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 DNAH17Q9UFH2 4485 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 TEX13DA0A0J9YY54 714 aaPredicted RBP9.41□□□□□ -0.9
SP140-211ENST00000486750 RPS10-NUDT3A0A1W2PQS6 291 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 PRM2P04554 102 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 SULT1A3P0DMM9 295 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 SULT1A4P0DMN0 295 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 MED14OSP0DP75 135 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 SPCS3P61009 180 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
SP140-211ENST00000486750 SELENOHQ8IZQ5 122 aaKnown RBP9.41□□□□□ -0.9
SP140-211ENST00000486750 CCDC71LQ8N9Z2 235 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 SLC24A4Q8NFF2 622 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 OR11H7Q8NGC8 314 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 OR4B1Q8NGF8 309 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 TERB2Q8NHR7 220 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 ZNF486Q96H40 463 aaPredicted RBP9.41□□□□□ -0.9
SP140-211ENST00000486750 GPN1Q9HCN4 374 aaPredicted RBP9.41□□□□□ -0.9
SP140-211ENST00000486750 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
SP140-211ENST00000486750 LCE2BO14633 110 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 OR4E1P0C645 316 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 PSG1P11464 419 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 HLA-DRB4P13762 266 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 NPY1RP25929 384 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 HTR2BP41595 481 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 EIF2B2P49770 351 aaKnown RBP9.4□□□□□ -0.9
SP140-211ENST00000486750 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 TMEM268Q5VZI3 342 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 TMED4Q7Z7H5 227 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 TCTE3Q8IZS6 198 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 ZFAND1Q8TCF1 268 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 GLYATL2Q8WU03 294 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
SP140-211ENST00000486750 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.4□□□□□ -0.9
SP140-211ENST00000486750 GPR132Q9UNW8 380 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 HLA-DRB4X5D2U9 266 aa9.4□□□□□ -0.9
SP140-211ENST00000486750 TRAV30A0A087WSZ9 112 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 BUB3O43684 328 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 SSNA1O43805 119 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 ATG12O94817 140 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 RD3LP0DJH9 198 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 YPEL3P61236 119 aaPredicted RBP9.39□□□□□ -0.91
SP140-211ENST00000486750 ZNF90Q03938 601 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 OR2F1Q13607 317 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 SURF2Q15527 256 aaPredicted RBP9.39□□□□□ -0.91
SP140-211ENST00000486750 C2orf83Q53S99 150 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 ZNF431Q8TF32 576 aaPredicted RBP9.39□□□□□ -0.91
SP140-211ENST00000486750 SCGB3A2Q96PL1 93 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 TMEM222Q9H0R3 208 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 NAA60Q9H7X0 242 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 C14orf166Q9Y224 244 aaKnown RBP9.39□□□□□ -0.91
SP140-211ENST00000486750 RYR1P21817 5038 aa9.39□□□□□ -0.91
SP140-211ENST00000486750 TOMM40O96008 361 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 IFNA21P01568 189 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 CXCL3P19876 107 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 UBE2MP61081 183 aaKnown RBP9.38□□□□□ -0.91
SP140-211ENST00000486750 LYZP61626 148 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
SP140-211ENST00000486750 PPP1R1AQ13522 171 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 C4orf46Q504U0 113 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 ZNF705AQ6ZN79 300 aaPredicted RBP9.38□□□□□ -0.91
SP140-211ENST00000486750 RBPMSQ93062 196 aaKnown RBP9.38□□□□□ -0.91
SP140-211ENST00000486750 C1QTNF4Q9BXJ3 329 aa9.38□□□□□ -0.91
SP140-211ENST00000486750 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
SP140-211ENST00000486750 CDS2O95674 445 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 ZNF705DP0CH99 300 aaPredicted RBP9.37□□□□□ -0.91
SP140-211ENST00000486750 ZNF705BP0CI00 300 aaPredicted RBP9.37□□□□□ -0.91
SP140-211ENST00000486750 SLC25A4P12235 298 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 ANXA3P12429 323 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 Q6ZR54 194 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 ZNF709Q8N972 641 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 COQ8AQ8NI60 647 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 NIPSNAP3BQ9BS92 247 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
SP140-211ENST00000486750 YTHDF2Q9Y5A9 579 aaKnown RBP9.37□□□□□ -0.91
SP140-211ENST00000486750 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 C9orf170A2RU37 121 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 NKX2-1P43699 371 aaPredicted RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 LGALS9BQ3B8N2 356 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 FAM78BQ5VT40 261 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 IGFL4Q6B9Z1 124 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 C1orf158Q8N1D5 194 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 C12orf45Q8N5I9 185 aaPredicted RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 RNASEH2CQ8TDP1 164 aaKnown RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 RBKSQ9H477 322 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 PAIP2BQ9ULR5 123 aaKnown RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 RFNGQ9Y644 331 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 PKD1P98161 4303 aa9.36□□□□□ -0.91
SP140-211ENST00000486750 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
SP140-211ENST00000486750 IGKV1D-37A0A075B6S9 117 aa9.35□□□□□ -0.91
SP140-211ENST00000486750 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
SP140-211ENST00000486750 C1QBP02746 253 aa9.35□□□□□ -0.91
SP140-211ENST00000486750 IAPPP10997 89 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms