RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 TMEM37Q8WXS4 190 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 PPP1R14BQ96C90 147 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 SLC25A32Q9H2D1 315 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 MRPL27Q9P0M9 148 aaKnown RBP9.71□□□□□ -0.86
HDAC6-229ENST00000486665 UFC1Q9Y3C8 167 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 TIMM9Q9Y5J7 89 aa9.71□□□□□ -0.86
HDAC6-229ENST00000486665 NOTCH3Q9UM47 2321 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 C2orf70A6NJV1 201 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 HYPMO75409 117 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 CSN3P07498 182 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 ELLP55199 621 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-229ENST00000486665 FFAR4Q5NUL3 377 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 SAMD5Q5TGI4 173 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 SLC51BQ86UW2 128 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 BAP18Q8IXM2 172 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 WFDC9Q8NEX5 89 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 GNPNAT1Q96EK6 184 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-229ENST00000486665 PSMG3Q9BT73 122 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-229ENST00000486665 VSIRQ9H7M9 311 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 DNAJC4Q9NNZ3 241 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 RABAC1Q9UI14 185 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 SELENOKQ9Y6D0 94 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 U3KQE9 123 aa9.7□□□□□ -0.86
HDAC6-229ENST00000486665 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 A8MWP6 167 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 OR5G3P0C626 314 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 C8orf88P0DMB2 117 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 SPP1P10451 314 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
HDAC6-229ENST00000486665 FOLR2P14207 255 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 CBLN1P23435 193 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 NPPCP23582 126 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 CRYBB3P26998 211 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
HDAC6-229ENST00000486665 Q6ZRG5 221 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 OR2G3Q8NGZ4 309 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 ST8SIA2Q92186 375 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 DAZ1Q9NQZ3 744 aaKnown RBP9.69□□□□□ -0.86
HDAC6-229ENST00000486665 SMPXQ9UHP9 88 aa9.69□□□□□ -0.86
HDAC6-229ENST00000486665 COL7A1Q02388 2944 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 IGHV7-4-1A0A0J9YVY3 117 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 COX7A2P2O60397 106 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 C4BPBP20851 252 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
HDAC6-229ENST00000486665 PXDC1Q5TGL8 231 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 MORN5Q5VZ52 161 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 SPATA31B1PQ5VZV4 182 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 UHRF2Q96PU4 802 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 METTL26Q96S19 204 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 KCNIP2Q9NS61 270 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 PEMTQ9UBM1 199 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 HIGD1AQ9Y241 93 aa9.68□□□□□ -0.86
HDAC6-229ENST00000486665 TRAV5A0A0B4J249 113 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 CHEK1O14757 476 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 EIF3GO75821 320 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC6-229ENST00000486665 RAB2AP61019 212 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 SERF2P84101 59 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 C10orf113Q5VZT2 155 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 OR1L4Q8NGR5 311 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 TMED6Q8WW62 240 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 ELOVL1Q9BW60 279 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
HDAC6-229ENST00000486665 SLC25A39Q9BZJ4 359 aaPredicted RBP9.67□□□□□ -0.86
HDAC6-229ENST00000486665 RYR3Q15413 4870 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 ELOA3CA0A087WX78 387 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-229ENST00000486665 ZNF98A6NK75 572 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 H3BRN7 92 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 BUB3O43684 328 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 SEC11BP0C7V7 166 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 CD33P20138 364 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 M6PRP20645 277 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 ACOT6Q3I5F7 207 aaPredicted RBP9.66□□□□□ -0.86
HDAC6-229ENST00000486665 LEMD1Q68G75 181 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 C16orf54Q6UWD8 224 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 MIR17HGQ75NE6 70 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 LINC00305Q7Z4B0 112 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 GATAD1Q8WUU5 269 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 SHANK2-AS3Q9BTD1 123 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 SEPSECSQ9HD40 501 aaKnown RBP9.66□□□□□ -0.86
HDAC6-229ENST00000486665 RPRMQ9NS64 109 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 MLXQ9UH92 298 aa9.66□□□□□ -0.86
HDAC6-229ENST00000486665 SEC14L6B5MCN3 397 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 IGLL1P15814 213 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 OXLD1Q5BKU9 147 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 FAM78BQ5VT40 261 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 FAM122CQ6P4D5 195 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 RPP25LQ8N5L8 163 aaKnown RBP9.65□□□□□ -0.86
HDAC6-229ENST00000486665 MARC2Q969Z3 335 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 PFDN5Q99471 154 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 RNF2Q99496 336 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 SIGLEC8Q9NYZ4 499 aa9.65□□□□□ -0.86
HDAC6-229ENST00000486665 DNAH9Q9NYC9 4486 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms