RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 KCNIP2Q9NS61 270 aa12.5□□□□□ -0.41
TRIM54-203ENST00000485306 IGHV3-35A0A0C4DH35 117 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 TMEM213A2RRL7 107 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 TOMM40O96008 361 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 RD3LP0DJH9 198 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 FGF7P21781 194 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 CAMLGP49069 296 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
TRIM54-203ENST00000485306 CYP2G1PQ6ZSU1 146 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 C9orf62Q8N4C0 152 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 MUC7Q8TAX7 377 aa12.49□□□□□ -0.41
TRIM54-203ENST00000485306 MRPL27Q9P0M9 148 aaKnown RBP12.49□□□□□ -0.41
TRIM54-203ENST00000485306 C17orf112F2Z3M2 114 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 AGPAT2O15120 278 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 TM4SF20Q53R12 229 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 BPIFCQ8NFQ6 507 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 CITED4Q96RK1 184 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 MGST2Q99735 147 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 SLC45A2Q9UMX9 530 aa12.48□□□□□ -0.41
TRIM54-203ENST00000485306 TRAV25A0A0B4J276 109 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 OR11H12B2RN74 326 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 CD7P09564 240 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 C8orf88P0DMB2 117 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 RPL29P47914 159 aaKnown RBP12.47□□□□□ -0.41
TRIM54-203ENST00000485306 OPCMLQ14982 345 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 PXDC1Q5TGL8 231 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
TRIM54-203ENST00000485306 OR51G1Q8NGK1 321 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 TMEM190Q8WZ59 177 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
TRIM54-203ENST00000485306 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 MLXQ9UH92 298 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 TIMM9Q9Y5J7 89 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 NBEAL2Q6ZNJ1 2754 aa12.47□□□□□ -0.41
TRIM54-203ENST00000485306 HNRNPCP07910 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM54-203ENST00000485306 PSG1P11464 419 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 S100A7P31151 101 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 ZNF90Q03938 601 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 RPL7L1Q6DKI1 246 aaKnown RBP12.46□□□□□ -0.41
TRIM54-203ENST00000485306 TMEM61Q8N0U2 210 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 DEFB125Q8N687 156 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 GINS3Q9BRX5 216 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 GGTLC1Q9BX51 225 aa12.46□□□□□ -0.41
TRIM54-203ENST00000485306 PUS1Q9Y606 427 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRIM54-203ENST00000485306 K7EMT4 169 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 YIF1AO95070 293 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 PLP1P60201 277 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 LAMTOR1Q6IAA8 161 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 TOMM20LQ6UXN7 152 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 Q6ZRG5 221 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 S100A7AQ86SG5 101 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 PSMG3Q9BT73 122 aaPredicted RBP12.45□□□□□ -0.42
TRIM54-203ENST00000485306 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
TRIM54-203ENST00000485306 ARV1Q9H2C2 271 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 SRD5A3Q9H8P0 318 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 DAZ1Q9NQZ3 744 aaKnown RBP12.45□□□□□ -0.42
TRIM54-203ENST00000485306 SELENOKQ9Y6D0 94 aa12.45□□□□□ -0.42
TRIM54-203ENST00000485306 PRR20EP86478 221 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 PRR20CP86479 221 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 PRR20DP86480 221 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 PRR20BP86481 221 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 PRR20AP86496 221 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
TRIM54-203ENST00000485306 SLC51BQ86UW2 128 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 STOML3Q8TAV4 291 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 PFDN2Q9UHV9 154 aa12.44□□□□□ -0.42
TRIM54-203ENST00000485306 IL4P05112 153 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 LINC00869P0C866 280 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 TPT1P13693 172 aaKnown RBP12.43□□□□□ -0.42
TRIM54-203ENST00000485306 NKX2-5P52952 324 aaPredicted RBP12.43□□□□□ -0.42
TRIM54-203ENST00000485306 B2MP61769 119 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 SERF2P84101 59 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 CASC10Q5T4H9 136 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 STPG3Q8N7X2 389 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 HSD17B11Q8NBQ5 300 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 ZNF414Q96IQ9 312 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 C20orf24Q9BUV8 137 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 ZFAND3Q9H8U3 227 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 SLC39A9Q9NUM3 307 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 PXMP4Q9Y6I8 212 aa12.43□□□□□ -0.42
TRIM54-203ENST00000485306 IGHV3OR16-8A0A075B7F1 116 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 ELOA3CA0A087WX78 387 aaPredicted RBP12.42□□□□□ -0.42
TRIM54-203ENST00000485306 BOLA2-SMG1P6H3BVE0 249 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 ATP6V0CP27449 155 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 BMI1P35226 326 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 MIC13Q5XKP0 118 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
TRIM54-203ENST00000485306 TMEM182Q6ZP80 229 aaPredicted RBP12.42□□□□□ -0.42
TRIM54-203ENST00000485306 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 METTL26Q96S19 204 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 RNF24Q9Y225 148 aa12.42□□□□□ -0.42
TRIM54-203ENST00000485306 HUWE1Q7Z6Z7 4374 aaKnown RBP12.41□□□□□ -0.42
TRIM54-203ENST00000485306 RBMY1BA6NDE4 496 aaKnown RBP12.41□□□□□ -0.42
TRIM54-203ENST00000485306 RBMY1EA6NEQ0 496 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms