RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 C2orf83Q53S99 150 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 Q6ZRM9 215 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.9
HDAC6-227ENST00000485102 SLC24A4Q8NFF2 622 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 DCANP1Q8TF63 244 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 GSKIPQ9P0R6 139 aa9.4□□□□□ -0.9
HDAC6-227ENST00000485102 A0A0G2JRQ6 117 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 L7N2F9 121 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 CLN5O75503 358 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 ADAP1O75689 374 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 IFNA10P01566 189 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 P0DMU3 169 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 C4BPBP20851 252 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 VAMP2P63027 116 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 POM121L12Q8N7R1 296 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 OR4D5Q8NGN0 318 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 METTL26Q96S19 204 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 SEPSECSQ9HD40 501 aaKnown RBP9.39□□□□□ -0.91
HDAC6-227ENST00000485102 PRR13Q9NZ81 148 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 U3KQE9 123 aa9.39□□□□□ -0.91
HDAC6-227ENST00000485102 IGHV3-66A0A0C4DH42 116 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 TSC22D2O75157 780 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 SLC25A4P12235 298 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 NPY1RP25929 384 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 OR4X1Q8NH49 305 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 SMIM8Q96KF7 97 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 RBKSQ9H477 322 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 STRAPQ9Y3F4 350 aaKnown RBP9.38□□□□□ -0.91
HDAC6-227ENST00000485102 ALG5Q9Y673 324 aa9.38□□□□□ -0.91
HDAC6-227ENST00000485102 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 GOSR2O14653 212 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 RTL8CO15255 209 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 IGKV1-17P01599 117 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 RNASE2P10153 161 aaKnown RBP9.37□□□□□ -0.91
HDAC6-227ENST00000485102 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-227ENST00000485102 P2RY1P47900 373 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 AP2S1P53680 142 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-227ENST00000485102 IZUMO4Q1ZYL8 232 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 BSXQ3C1V8 233 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 STXBP6Q8NFX7 210 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 FNDC4Q9H6D8 234 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-227ENST00000485102 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
HDAC6-227ENST00000485102 PKD1P98161 4303 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 SCGB1D2O95969 90 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 FABP1P07148 127 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 ZNF688P0C7X2 276 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 S100A7P31151 101 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 EIF2B2P49770 351 aaKnown RBP9.36□□□□□ -0.91
HDAC6-227ENST00000485102 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
HDAC6-227ENST00000485102 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
HDAC6-227ENST00000485102 C1QTNF4Q9BXJ3 329 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 SLC25A31Q9H0C2 315 aa9.36□□□□□ -0.91
HDAC6-227ENST00000485102 MRPL36Q9P0J6 103 aaKnown RBP9.36□□□□□ -0.91
HDAC6-227ENST00000485102 HELTA6NFD8 242 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 PRSS29PA6NIE9 313 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 E5RGE8 158 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 OPRK1P41145 380 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 RAP2BP61225 183 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 NUTF2P61970 127 aaKnown RBP9.35□□□□□ -0.91
HDAC6-227ENST00000485102 HBG1P69891 147 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 HBG2P69892 147 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 STX12Q86Y82 276 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 FAM210BQ96KR6 192 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 NEU1Q99519 415 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 NDUFAF3Q9BU61 184 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 GGACTQ9BVM4 153 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 PSENENQ9NZ42 101 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 CELA1Q9UNI1 258 aa9.35□□□□□ -0.91
HDAC6-227ENST00000485102 FNDC10F2Z333 226 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 SSSCA1O60232 199 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 MBPP02686 304 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-227ENST00000485102 GIPP09681 153 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-227ENST00000485102 NUP62P37198 522 aaPredicted RBP9.34□□□□□ -0.91
HDAC6-227ENST00000485102 S100A10P60903 97 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 MLANAQ16655 118 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 SPINK9Q5DT21 86 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 OR10P1Q8NGE3 313 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 THAP6Q8TBB0 222 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 GLMPQ8WWB7 406 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 SLC35E1Q96K37 410 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 CLEC5AQ9NY25 188 aa9.34□□□□□ -0.91
HDAC6-227ENST00000485102 K7EPK0 472 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 CCSO14618 274 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 CFDP00746 253 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-227ENST00000485102 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 BCAP31P51572 246 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 YPEL3P61236 119 aaPredicted RBP9.33□□□□□ -0.92
HDAC6-227ENST00000485102 POLR2GP62487 172 aaKnown RBP eCLIP9.33□□□□□ -0.92
HDAC6-227ENST00000485102 BAXQ07812 192 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 SPANXN5Q5MJ07 72 aa9.33□□□□□ -0.92
HDAC6-227ENST00000485102 ZNF705AQ6ZN79 300 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms