RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 PRIMA1Q86XR5 153 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 IQCF2Q8IXL9 164 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 NUDT19A8MXV4 375 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 CDX1P47902 265 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-214ENST00000485091 LEMD1Q68G75 181 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 KLHL30-AS1Q8NEE0 82 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 MBD3L1Q8WWY6 194 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 CITED2Q99967 270 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-214ENST00000485091 C19orf24Q9BVV8 132 aa13.44□□□□□ -0.26
CCDC78-214ENST00000485091 IGHV4OR15-8A0A075B7B6 117 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 A0A087WW49 117 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 CCL20P78556 96 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 FAM209BQ5JX69 171 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 TMPRSS5Q9H3S3 457 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 ZFAND3Q9H8U3 227 aa13.43□□□□□ -0.26
CCDC78-214ENST00000485091 MRPL27Q9P0M9 148 aaKnown RBP13.43□□□□□ -0.26
CCDC78-214ENST00000485091 ZNF320A2RRD8 509 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 I3L521 148 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 UNQ9165/PRO28630Q6UXU0 137 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 SLC7A5P1Q8MH63 180 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 DUX3Q96PT4 197 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 RNF2Q99496 336 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 PFDN2Q9UHV9 154 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 RABAC1Q9UI14 185 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 HBE1P02100 147 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 C8orf86Q6ZUL3 223 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 C4orf3Q8WVX3 66 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 SCRT1Q9BWW7 348 aa13.42□□□□□ -0.26
CCDC78-214ENST00000485091 MRPL32Q9BYC8 188 aaKnown RBP13.42□□□□□ -0.26
CCDC78-214ENST00000485091 SLC25A39Q9BZJ4 359 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-214ENST00000485091 TECRQ9NZ01 308 aaKnown RBP13.42□□□□□ -0.26
CCDC78-214ENST00000485091 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
CCDC78-214ENST00000485091 STAG3L2P0CL84 134 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 ARL14EPLP0DKL9 152 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 C8orf88P0DMB2 117 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 SLC25A2Q9BXI2 301 aa13.41□□□□□ -0.26
CCDC78-214ENST00000485091 IGHV3-49A0A0A0MS15 119 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 NDUFA4O00483 81 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 OR7C2O60412 319 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 SNRPCP09234 159 aaKnown RBP13.4□□□□□ -0.26
CCDC78-214ENST00000485091 TAS2R45P59539 299 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 COMMD7Q86VX2 200 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 OR11H1Q8NG94 326 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 LYPD6BQ8NI32 183 aa13.4□□□□□ -0.26
CCDC78-214ENST00000485091 TSSC4Q9Y5U2 329 aaPredicted RBP13.4□□□□□ -0.26
CCDC78-214ENST00000485091 IGHV3OR16-13A0A075B7E8 117 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 IGHV3-74A0A0B4J1X5 117 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 IGHV3-66A0A0C4DH42 116 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 LINC00862A6NCI5 91 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 H3BRN7 92 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 IL34Q6ZMJ4 242 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 DPF1Q92782 380 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 SHANK2-AS3Q9BTD1 123 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 A0A1B0GUS0 222 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 CXorf1O96002 111 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 OR10J4P0C629 311 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 PYYP10082 97 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 SLURP1P55000 103 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 FOXL1Q12952 345 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 FAM106AQ4KMX7 169 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 KHDC3LQ587J8 217 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 FAM167A-AS1Q96KT0 104 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 METTL26Q96S19 204 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
CCDC78-214ENST00000485091 TRAV1-1A0A0B4J248 108 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 ZNF98A6NK75 572 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 LINC01619G3V211 115 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-214ENST00000485091 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
CCDC78-214ENST00000485091 NSUN5P1Q3KNT7 163 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 OR1N2Q8NGR9 330 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
CCDC78-214ENST00000485091 NPPCP23582 126 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 HAGHQ16775 308 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 TM4SF20Q53R12 229 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 GPHB5Q86YW7 130 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 TMEM190Q8WZ59 177 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 PAXXQ9BUH6 204 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 OR51M1Q9H341 326 aa13.37□□□□□ -0.27
CCDC78-214ENST00000485091 GCHFRP30047 84 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 NDUFA5Q16718 116 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 KRTAP24-1Q3LI83 254 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 S100A7AQ86SG5 101 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 EDN2P20800 178 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 UBE2G2P60604 165 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 AWAT1Q58HT5 328 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 PQLC2Q6ZP29 291 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 WFDC12Q8WWY7 111 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 RAX2Q96IS3 184 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 TMEM231Q9H6L2 316 aa13.36□□□□□ -0.27
CCDC78-214ENST00000485091 ZP3P21754 424 aa13.35□□□□□ -0.27
CCDC78-214ENST00000485091 CRYBB3P26998 211 aa13.35□□□□□ -0.27
CCDC78-214ENST00000485091 UBE2L3P68036 154 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms