RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
SREBF1-213ENST00000485080 IGSF23A1L1A6 192 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 H0YIZ8 118 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 DNASE2O00115 360 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-213ENST00000485080 RPL11P62913 178 aaKnown RBP13.2□□□□□ -0.3
SREBF1-213ENST00000485080 HBG1P69891 147 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 HBG2P69892 147 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 ATP6V1FQ16864 119 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 GBGT1Q8N5D6 347 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 FBXL17Q9UF56 701 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 U3KQK5 164 aa13.2□□□□□ -0.3
SREBF1-213ENST00000485080 IGKV3-7A0A075B6H7 116 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 MPC2O95563 127 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 GATA2P23769 480 aaPredicted RBP13.19□□□□□ -0.3
SREBF1-213ENST00000485080 TFPI2P48307 235 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 OXA1LQ15070 435 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 PXDC1Q5TGL8 231 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 ZNF546Q86UE3 836 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 RNF126Q9BV68 326 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 SLC25A31Q9H0C2 315 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 ZMAT4Q9H898 229 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 MAP6D1Q9H9H5 199 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 UQCC1Q9NVA1 299 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
SREBF1-213ENST00000485080 LOC102724200A0A096LPH7 203 aaPredicted RBP13.18□□□□□ -0.3
SREBF1-213ENST00000485080 PET100P0DJ07 73 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 BAXQ07812 192 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 TMEM217Q8N7C4 229 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 STXBP6Q8NFX7 210 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 TMEM147Q9BVK8 224 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 GGTLC1Q9BX51 225 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 NRN1Q9NPD7 142 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 UBQLN2Q9UHD9 624 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 WDR83OSQ9Y284 106 aa13.18□□□□□ -0.3
SREBF1-213ENST00000485080 AGPAT2O15120 278 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 LINC00869P0C866 280 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 ORM2P19652 201 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 CXCL3P19876 107 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 RAB31Q13636 194 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 LRRC37A5PQ49AS3 106 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 S100A7AQ86SG5 101 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 ASB13Q8WXK3 278 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 MGST2Q99735 147 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 SPATA25Q9BR10 227 aa13.17□□□□□ -0.3
SREBF1-213ENST00000485080 KIR2DL5BA0A0G2JN68 375 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 KIR2DL5BA0A0G2JPC4 375 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 HYPMO75409 117 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 LYL1P12980 280 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 EWSR1Q01844 656 aaKnown RBP eCLIP13.16□□□□□ -0.3
SREBF1-213ENST00000485080 WFDC3Q8IUB2 231 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 KIR2DL5AQ8N109 375 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 GPR82Q96P67 336 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 MED28Q9H204 178 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 RNF24Q9Y225 148 aa13.16□□□□□ -0.3
SREBF1-213ENST00000485080 MPDU1O75352 247 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 CAMLGP49069 296 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 NHLH2Q02577 135 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 SAMD13Q5VXD3 122 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 OR11H7Q8NGC8 314 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 RCHY1Q96PM5 261 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 SHANK2-AS3Q9BTD1 123 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
SREBF1-213ENST00000485080 H3BRN7 92 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 UBE2CO00762 179 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 APOC4P55056 127 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 DEFB131AP59861 70 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 RAP2BP61225 183 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 PRR20EP86478 221 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 PRR20CP86479 221 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 PRR20DP86480 221 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 PRR20BP86481 221 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 PRR20AP86496 221 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 FCN2Q15485 313 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
SREBF1-213ENST00000485080 SLC25A39Q9BZJ4 359 aaPredicted RBP13.14□□□□□ -0.31
SREBF1-213ENST00000485080 ELOA3CA0A087WX78 387 aaPredicted RBP13.13□□□□□ -0.31
SREBF1-213ENST00000485080 GALR1P47211 349 aa13.13□□□□□ -0.31
SREBF1-213ENST00000485080 RPL29P47914 159 aaKnown RBP13.13□□□□□ -0.31
SREBF1-213ENST00000485080 SNRPD3P62318 126 aaKnown RBP13.13□□□□□ -0.31
SREBF1-213ENST00000485080 PATE2Q6UY27 113 aa13.13□□□□□ -0.31
SREBF1-213ENST00000485080 OR5C1Q8NGR4 320 aa13.13□□□□□ -0.31
SREBF1-213ENST00000485080 ARL6Q9H0F7 186 aa13.13□□□□□ -0.31
SREBF1-213ENST00000485080 SOCS3O14543 225 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 MEOX2P50222 304 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 OPCMLQ14982 345 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 Q6ZWC4 215 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 ARV1Q9H2C2 271 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 SLC25A32Q9H2D1 315 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
SREBF1-213ENST00000485080 UBE2L5PA0A1B0GUS4 154 aa13.11□□□□□ -0.31
SREBF1-213ENST00000485080 GIPP09681 153 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms