RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 P0DMU3 169 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 FAM231AP0DMU4 169 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 FAM231CP0DMU5 169 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 AP3S2P59780 193 aa8.21□□□□□ -1.1
SCFD1-206ENST00000484733 CIB3Q96Q77 187 aaPredicted RBP8.21□□□□□ -1.1
SCFD1-206ENST00000484733 A8MTW9 85 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 NOL3O60936 208 aaKnown RBP8.2□□□□□ -1.1
SCFD1-206ENST00000484733 MEOX2P50222 304 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 LYZP61626 148 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 RPP30P78346 268 aaKnown RBP8.2□□□□□ -1.1
SCFD1-206ENST00000484733 OXA1LQ15070 435 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 GGNBP1Q5YKI7 109 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 POM121L12Q8N7R1 296 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 MCFD2Q8NI22 146 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 TRIM63Q969Q1 353 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 SLC25A21Q9BQT8 299 aaPredicted RBP8.2□□□□□ -1.1
SCFD1-206ENST00000484733 NDUFAF3Q9BU61 184 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 TMED3Q9Y3Q3 217 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 PRSS46E5RG02 174 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 ZNF709Q8N972 641 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 LINC00052Q96N35 136 aa8.2□□□□□ -1.1
SCFD1-206ENST00000484733 IGKV1OR2-108A0A075B7D4 117 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 SFT2D2O95562 160 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 PSG9Q00887 426 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 ZNF767PQ75MW2 155 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 TOMM5Q8N4H5 51 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 COQ8AQ8NI60 647 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 HECTD4Q9Y4D8 3996 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 IAPPP10997 89 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 EBLN2Q6P2I7 272 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 OR4D5Q8NGN0 318 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 KRTAP17-1Q9BYP8 105 aa8.19□□□□□ -1.1
SCFD1-206ENST00000484733 A0A0J9YX75 114 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 SYNGR2O43760 224 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 S100A7P31151 101 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 DEFB1P60022 68 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 OR2F1Q13607 317 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 TMED4Q7Z7H5 227 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 PPP1R14BQ96C90 147 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 RPRMQ9NS64 109 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 DKK2Q9UBU2 259 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 V9GYH0 126 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 GALR1P47211 349 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 FXYD7P58549 80 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 PYDC2Q56P42 97 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 C1orf158Q8N1D5 194 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 GPR82Q96P67 336 aa8.18□□□□□ -1.1
SCFD1-206ENST00000484733 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 ZNF98A6NK75 572 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
SCFD1-206ENST00000484733 LGALS9BQ3B8N2 356 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 FAM78BQ5VT40 261 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 BPIFCQ8NFQ6 507 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 OR1B1Q8NGR6 318 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 C17orf77Q96MU5 243 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 NIPSNAP3BQ9BS92 247 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 SLC25A32Q9H2D1 315 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 VAMP1P23763 118 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 SCRT1Q9BWW7 348 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 DOK5Q9P104 306 aa8.17□□□□□ -1.1
SCFD1-206ENST00000484733 FAT2Q9NYQ8 4349 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 HBE1P02100 147 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 PPP1R1AQ13522 171 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
SCFD1-206ENST00000484733 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
SCFD1-206ENST00000484733 IGHV3OR16-12A0A075B7B8 117 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 F6UB75 175 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 WRBO00258 174 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 ID3Q02535 119 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 FAM222AQ5U5X8 452 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 CCDC190Q86UF4 302 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 IGF2BP2-AS1Q96M15 143 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 RSG1Q9BU20 258 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 MAGT1Q9H0U3 335 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 STRAPQ9Y3F4 350 aaKnown RBP8.15□□□□□ -1.1
SCFD1-206ENST00000484733 DUSP14O95147 198 aaKnown RBP8.15□□□□□ -1.1
SCFD1-206ENST00000484733 HOXB5P09067 269 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 EMP1P54849 157 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 C7orf50Q9BRJ6 194 aaKnown RBP8.15□□□□□ -1.1
SCFD1-206ENST00000484733 TMEM147Q9BVK8 224 aa8.15□□□□□ -1.1
SCFD1-206ENST00000484733 LOC102723971A0A1B0GUV8 181 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 S100A5P33763 92 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 PLP1P60201 277 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 B2MP61769 119 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 RNF212Q495C1 297 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 SPANXN5Q5MJ07 72 aa8.14□□□□□ -1.11
SCFD1-206ENST00000484733 TMEM182Q6ZP80 229 aaPredicted RBP8.14□□□□□ -1.11
SCFD1-206ENST00000484733 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
SCFD1-206ENST00000484733 H3BRN7 92 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms