RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 MUC15Q8N387 334 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 C11orf42Q8N5U0 333 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF114Q8NC26 417 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 ST6GALNAC3Q8NDV1 305 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF596Q8TC21 504 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 LRRC29Q8WV35 223 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 TNFRSF14Q92956 283 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 GPR82Q96P67 336 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 NDFIP1Q9BT67 221 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 DERL1Q9BUN8 251 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF430Q9H8G1 570 aaPredicted RBP3.8□□□□□ -1.8
SSBP1-211ENST00000484178 IDI2-AS1Q9NZ38 188 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 TP53TG3Q9ULZ0 132 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 CHD7Q9P2D1 2997 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 KIAA1549Q9HCM3 1950 aa3.8□□□□□ -1.8
SSBP1-211ENST00000484178 SPAG17Q6Q759 2223 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 ATG2BQ96BY7 2078 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TRAV17A0A0B4J275 112 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 IGHV2-70DA0A0C4DH43 119 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TCRBV4S1A1TA0A5B7 111 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 GRIFINA4D1Z8 144 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 K7EQM0 130 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 M0R2Z0 102 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CCL24O00175 119 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 GAS8-AS1O95177 125 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CGAP01215 116 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 PPBPP02775 128 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 C3orf79P0CE67 100 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CT45A6P0DMU7 189 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CT45A5P0DMU8 189 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CT45A7P0DMV0 189 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CRYBB3P26998 211 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 SSTR5P35346 364 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF83P51522 516 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 MFAP2P55001 183 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 PLP1P60201 277 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 ARF6P62330 175 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 RPL8P62917 257 aaKnown RBP3.79□□□□□ -1.8
SSBP1-211ENST00000484178 HERV-K104P63124 156 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CLEC12BQ2HXU8 276 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 VMA21Q3ZAQ7 101 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CT45A1Q5HYN5 189 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TIMM23BQ5SRD1 257 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 C10orf113Q5VZT2 155 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF833PQ6ZTB9 187 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 LYPD1Q8N2G4 141 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 ABHD12Q8N2K0 398 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 LINC00311Q8N616 119 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 Q8N976 141 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 C5orf17Q8NAS9 161 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 GATD1Q8NB37 220 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 OR4C13Q8NGP0 309 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 OR1N2Q8NGR9 330 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 CT45A3Q8NHU0 189 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 C18orf32Q8TCD1 76 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TRGV9Q99603 122 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 RNF5Q99942 180 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 PAXXQ9BUH6 204 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 VCX2Q9H322 139 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 RPP21Q9H633 154 aaKnown RBP3.79□□□□□ -1.8
SSBP1-211ENST00000484178 TMEM14CQ9P0S9 112 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 RPUSD1Q9UJJ7 312 aaKnown RBP3.79□□□□□ -1.8
SSBP1-211ENST00000484178 LINC00312Q9Y6C7 94 aa3.79□□□□□ -1.8
SSBP1-211ENST00000484178 PCDH15Q96QU1 1955 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 IGLV3-9A0A075B6K5 115 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 IGKV1D-17A0A075B6S4 117 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 A0A1B0GXF2 115 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 IGLC7A0M8Q6 106 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SHISA9B4DS77 424 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 GGTLC3B5MD39 225 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 K7ERU9 68 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SLC17A3O00476 420 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 CHEK1O14757 476 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SIVA1O15304 175 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 ZNHIT1O43257 154 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SPRY3O43610 288 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 CD5LO43866 347 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 NUPR1O60356 82 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 FSTL3O95633 263 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 APOHP02749 345 aaPredicted RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 CECR9P0C854 216 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SAA2P0DJI9 122 aaPredicted RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 RNASE2P10153 161 aaKnown RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 MGST1P10620 155 aaKnown RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 CSN1S1P47710 185 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 ZNF137PP52743 207 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 FOXA3P55318 350 aaPredicted RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 DSCR9P59020 149 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 RHOGP84095 191 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 HIST1H1AQ02539 215 aaPredicted RBP3.78□□□□□ -1.8
SSBP1-211ENST00000484178 RIGQ13278 110 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 EDDM3AQ14507 147 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 GCSAMLQ5JQS6 135 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 TEX36Q5VZQ5 186 aa3.78□□□□□ -1.8
SSBP1-211ENST00000484178 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms